Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.31□□□□□ -1.72
EIF4A1P60842 CYCSP32-201ENST00000440548 321 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 RPL7P36-201ENST00000444633 681 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 AP000542.1-201ENST00000448473 371 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.31□□□□□ -1.72
EIF4A1P60842 MTCO1P42-201ENST00000457379 726 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 RPL37P25-201ENST00000507308 276 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
EIF4A1P60842 AF213884.2-201ENST00000510417 903 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.31□□□□□ -1.72
EIF4A1P60842 SNORA70.19-201ENST00000516717 90 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 OR8L1P-201ENST00000534005 955 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.31□□□□□ -1.72
EIF4A1P60842 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.31□□□□□ -1.72
EIF4A1P60842 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.31□□□□□ -1.72
EIF4A1P60842 AP003465.2-201ENST00000602571 373 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 AC025946.2-201ENST00000603398 234 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 AC025588.3-201ENST00000604182 274 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 AC112191.3-201ENST00000604371 277 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.31□□□□□ -1.72
EIF4A1P60842 AL513477.2-201ENST00000607858 568 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 AC108747.1-201ENST00000609508 535 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 AC013476.2-201ENST00000614456 459 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 AC004009.2-201ENST00000623016 728 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
EIF4A1P60842 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
EIF4A1P60842 CEP170P1-201ENST00000502249 4587 ntBASIC4.31□□□□□ -1.72
EIF4A1P60842 TNPO1P3-201ENST00000436471 2662 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
EIF4A1P60842 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
EIF4A1P60842 XIAPP3-201ENST00000312918 795 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 SNORA38.1-201ENST00000364172 131 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.3□□□□□ -1.72
EIF4A1P60842 RNU6-356P-201ENST00000384140 107 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 UBE2V1P10-201ENST00000414685 269 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.3□□□□□ -1.72
EIF4A1P60842 AC091390.3-201ENST00000426478 338 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 FTH1P6-201ENST00000430768 320 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 MTND1P4-201ENST00000435196 415 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.3□□□□□ -1.72
EIF4A1P60842 AL033528.1-201ENST00000453780 140 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 KLF3P2-201ENST00000465138 268 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 AC087312.1-201ENST00000471411 480 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 AC104563.1-201ENST00000476147 376 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 AP000926.1-201ENST00000479573 241 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 LARP1BP2-201ENST00000486594 519 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.3□□□□□ -1.72
EIF4A1P60842 AC138853.1-201ENST00000503549 823 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.3□□□□□ -1.72
EIF4A1P60842 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.3□□□□□ -1.72
EIF4A1P60842 RN7SKP298-201ENST00000515950 94 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.3□□□□□ -1.72
EIF4A1P60842 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.3□□□□□ -1.72
EIF4A1P60842 AC022878.1-201ENST00000530684 149 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.3□□□□□ -1.72
EIF4A1P60842 AC009063.1-201ENST00000563342 702 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
EIF4A1P60842 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.3□□□□□ -1.72
EIF4A1P60842 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.3□□□□□ -1.72
EIF4A1P60842 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.3□□□□□ -1.72
EIF4A1P60842 AL390208.1-201ENST00000605885 644 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 AC098614.4-201ENST00000607601 462 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 AC131902.3-201ENST00000611767 581 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.3□□□□□ -1.72
EIF4A1P60842 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
EIF4A1P60842 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
EIF4A1P60842 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
EIF4A1P60842 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.3□□□□□ -1.72
EIF4A1P60842 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
EIF4A1P60842 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.29□□□□□ -1.72
EIF4A1P60842 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
EIF4A1P60842 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
EIF4A1P60842 AC097714.1-201ENST00000511272 1647 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.29□□□□□ -1.72
EIF4A1P60842 RNU1-70P-201ENST00000362618 164 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 RNU6-744P-201ENST00000365557 107 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 RNU6-1316P-201ENST00000384242 108 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 U3.19-201ENST00000390893 196 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 RPL17P50-201ENST00000396131 546 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.29□□□□□ -1.72
EIF4A1P60842 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.29□□□□□ -1.72
EIF4A1P60842 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.29□□□□□ -1.72
EIF4A1P60842 MTATP6P27-201ENST00000416987 621 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
EIF4A1P60842 AC012065.2-201ENST00000421295 375 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 AC002075.2-201ENST00000425207 252 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.29□□□□□ -1.72
EIF4A1P60842 AC244505.5-201ENST00000443639 207 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
EIF4A1P60842 RPL29P29-201ENST00000448725 423 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.29□□□□□ -1.72
EIF4A1P60842 Z82190.1-201ENST00000454534 490 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 RPL9P33-201ENST00000484311 566 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 AC107401.1-201ENST00000503426 685 ntBASIC4.29□□□□□ -1.72
EIF4A1P60842 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.29□□□□□ -1.72
EIF4A1P60842 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.29□□□□□ -1.72
EIF4A1P60842 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.29□□□□□ -1.72
EIF4A1P60842 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.29□□□□□ -1.72
EIF4A1P60842 TPMTP1-201ENST00000592307 737 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms