Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.72□□□□□ -2.13
HIST1H2BDP58876 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.72□□□□□ -2.13
HIST1H2BDP58876 AC024341.1-201ENST00000526444 1552 ntBASIC1.72□□□□□ -2.13
HIST1H2BDP58876 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 SNORA3A-201ENST00000364113 130 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 RNA5SP160-201ENST00000364866 120 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 RNU6-657P-201ENST00000383904 107 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 RNU6-883P-201ENST00000384597 107 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AL591416.1-201ENST00000404015 867 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 SUMO2P12-201ENST00000405924 140 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 RNU6-1328P-201ENST00000410938 106 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 RPS7P9-201ENST00000414704 586 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AC008173.1-201ENST00000418901 264 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 RAC1P8-201ENST00000427086 527 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AC022018.1-201ENST00000430685 241 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 USP12PX-201ENST00000432383 1057 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 TRGVB-201ENST00000453257 471 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 MTND3P4-201ENST00000453537 303 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 GTF2IP12-201ENST00000456547 356 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AC091959.2-201ENST00000477363 321 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 HSPE1P6-201ENST00000479457 291 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 XKRY-201ENST00000510392 1100 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 SNORA31.22-201ENST00000517204 135 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AP000916.1-201ENST00000533869 835 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AL022067.1-201ENST00000602426 454 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 SNORD14A-201ENST00000606526 91 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 VN1R9P-201ENST00000614184 867 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AL445493.3-201ENST00000619568 477 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 DUXAP9-208ENST00000622815 614 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AL512506.2-201ENST00000624472 458 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 AL354685.2-201ENST00000448218 1447 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 ZNF849P-201ENST00000594711 1566 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 MTND4P35-201ENST00000604257 1375 ntBASIC1.71□□□□□ -2.14
HIST1H2BDP58876 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 AC007785.2-201ENST00000598627 1916 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 SNORA63.1-201ENST00000362493 131 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 SNORD62.1-201ENST00000362541 86 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 SNORA38-201ENST00000363946 132 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 RNU6-76P-201ENST00000384060 104 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 TMSB4XP8-201ENST00000402089 135 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 HMGB1P11-201ENST00000413899 637 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 TMSB4XP6-201ENST00000415187 135 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 SEPT2P1-201ENST00000419651 180 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 TMSB4XP1-201ENST00000424567 135 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 RPL7P2-201ENST00000427639 268 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 AC234064.1-201ENST00000436312 247 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 AC006028.1-201ENST00000438379 402 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 GPM6BP3-201ENST00000442797 145 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 ANKRD26P4-201ENST00000455755 950 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 RPS29P33-201ENST00000456717 146 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 LARP1BP2-201ENST00000486594 519 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 AL049874.1-201ENST00000489560 388 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 AC090453.1-201ENST00000495560 436 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 PSMA2P1-201ENST00000526365 646 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 AP002748.2-201ENST00000528671 348 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 AL391261.3-201ENST00000557194 520 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.7□□□□□ -2.14
HIST1H2BDP58876 AC135628.1-201ENST00000568867 534 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 AC105137.2-201ENST00000569073 466 ntBASIC1.7□□□□□ -2.14
HIST1H2BDP58876 MIR5002-201ENST00000584713 97 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms