Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLRN1P58418 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLRN1P58418 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CLRN1P58418 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
CLRN1P58418 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLRN1P58418 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLRN1P58418 MFSD8-242ENST00000641690 4199 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 AC116667.1-201ENST00000604855 2072 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 XIAPP3-201ENST00000312918 795 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 Y_RNA.378-201ENST00000365652 113 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 RNU6-946P-201ENST00000383878 107 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 RNU6-701P-201ENST00000384059 107 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 AL583834.1-201ENST00000406943 343 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 RN7SKP106-201ENST00000410832 272 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 RAB28P1-201ENST00000411517 641 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.06□□□□□ -1.76
CLRN1P58418 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.06□□□□□ -1.76
CLRN1P58418 RPL21P91-201ENST00000429231 479 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.06□□□□□ -1.76
CLRN1P58418 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.06□□□□□ -1.76
CLRN1P58418 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.06□□□□□ -1.76
CLRN1P58418 PRPS1P1-201ENST00000445305 876 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLRN1P58418 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 AC009963.2-201ENST00000453431 138 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.06□□□□□ -1.76
CLRN1P58418 AC083904.1-201ENST00000487828 231 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 RPL23AP55-201ENST00000498163 452 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 CCDC34P1-201ENST00000507441 517 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 RBBP4P6-201ENST00000508098 202 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.06□□□□□ -1.76
CLRN1P58418 OR5D15P-201ENST00000531671 942 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 AC022882.1-201ENST00000532142 501 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.06□□□□□ -1.76
CLRN1P58418 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.06□□□□□ -1.76
CLRN1P58418 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.06□□□□□ -1.76
CLRN1P58418 AC105129.1-201ENST00000560250 297 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 MIR4270-201ENST00000581799 70 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.06□□□□□ -1.76
CLRN1P58418 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.06□□□□□ -1.76
CLRN1P58418 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.06□□□□□ -1.76
CLRN1P58418 FAM25E-202ENST00000608562 189 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.06□□□□□ -1.76
CLRN1P58418 AC005086.4-201ENST00000623065 213 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 AC091905.2-201ENST00000623143 306 ntBASIC4.06□□□□□ -1.76
CLRN1P58418 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.06□□□□□ -1.76
CLRN1P58418 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CLRN1P58418 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLRN1P58418 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.06□□□□□ -1.76
CLRN1P58418 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CLRN1P58418 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.06□□□□□ -1.76
CLRN1P58418 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLRN1P58418 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.06□□□□□ -1.76
CLRN1P58418 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.05□□□□□ -1.76
CLRN1P58418 EOGT-210ENST00000615922 1931 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
CLRN1P58418 U3.12-201ENST00000364498 214 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 SNORA23-201ENST00000365128 182 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 RNU6-1227P-201ENST00000383981 107 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 RNA5SP87-201ENST00000384155 118 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 MIR1302-11-201ENST00000408051 138 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 MIR1302-9-201ENST00000408365 138 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 MIR1302-10-201ENST00000408734 138 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.05□□□□□ -1.76
CLRN1P58418 RPL30P2-201ENST00000414021 291 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 RPS23P10-201ENST00000416185 486 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.05□□□□□ -1.76
CLRN1P58418 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.05□□□□□ -1.76
CLRN1P58418 AC090774.1-201ENST00000435925 246 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 CYCSP43-201ENST00000438233 310 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 AC006466.1-201ENST00000438721 289 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.05□□□□□ -1.76
CLRN1P58418 AL772161.1-201ENST00000439130 476 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 HMGB3P11-201ENST00000440127 604 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 Y_RNA.632-201ENST00000459189 102 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 RNU6-1208P-201ENST00000459588 107 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.05□□□□□ -1.76
CLRN1P58418 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.05□□□□□ -1.76
CLRN1P58418 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.05□□□□□ -1.76
CLRN1P58418 AC117522.3-201ENST00000507974 584 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.05□□□□□ -1.76
CLRN1P58418 RNU6-390P-201ENST00000516259 103 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 HMGB1P19-201ENST00000517578 577 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 IGKV1-32-201ENST00000519290 311 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.05□□□□□ -1.76
CLRN1P58418 AL137161.1-201ENST00000532231 390 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 RPL21P7-201ENST00000557463 483 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.05□□□□□ -1.76
CLRN1P58418 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.05□□□□□ -1.76
CLRN1P58418 AC005034.5-201ENST00000604219 466 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 AC113139.1-201ENST00000605049 239 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 MIR1302-2-201ENST00000607096 138 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.05□□□□□ -1.76
CLRN1P58418 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.05□□□□□ -1.76
CLRN1P58418 AL049539.1-201ENST00000611964 459 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.05□□□□□ -1.76
CLRN1P58418 AC140113.4-201ENST00000622087 222 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 AC091953.3-201ENST00000623220 236 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 AL645937.1-201ENST00000641739 1652 ntBASIC4.05□□□□□ -1.76
CLRN1P58418 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms