Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 HMGN2P28-201ENST00000606102 262 ntBASIC3.22□□□□□ -1.89
RIPK4P57078 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RIPK4P57078 AC140725.3-201ENST00000616193 880 ntBASIC3.22□□□□□ -1.89
RIPK4P57078 CTSLP2-204ENST00000629029 392 ntBASIC3.22□□□□□ -1.89
RIPK4P57078 FO624990.1-201ENST00000636373 85 ntBASIC3.22□□□□□ -1.89
RIPK4P57078 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.21□□□□□ -1.89
RIPK4P57078 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.21□□□□□ -1.9
RIPK4P57078 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.21□□□□□ -1.9
RIPK4P57078 RNA5SP289-201ENST00000362332 137 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 RNU6-582P-201ENST00000362989 107 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 MIR217-201ENST00000384817 110 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 RNA5SP56-201ENST00000410277 118 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.21□□□□□ -1.9
RIPK4P57078 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.21□□□□□ -1.9
RIPK4P57078 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.21□□□□□ -1.9
RIPK4P57078 RPL31P54-201ENST00000429803 370 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 ELOCP13-201ENST00000443934 329 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 AC244505.3-201ENST00000454598 187 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.21□□□□□ -1.9
RIPK4P57078 OR5H5P-201ENST00000503164 928 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 AC020699.1-201ENST00000505161 445 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 ARL4AP2-201ENST00000507378 601 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 RN7SKP265-201ENST00000516448 223 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 IGKV2D-36-201ENST00000518643 226 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.21□□□□□ -1.9
RIPK4P57078 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.21□□□□□ -1.9
RIPK4P57078 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.21□□□□□ -1.9
RIPK4P57078 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.21□□□□□ -1.9
RIPK4P57078 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.21□□□□□ -1.9
RIPK4P57078 AC090888.2-201ENST00000559765 1144 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.21□□□□□ -1.9
RIPK4P57078 RPP40P2-201ENST00000603596 712 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 AL450336.1-201ENST00000605180 586 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 AP005137.2-201ENST00000609238 400 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 AC093673.2-201ENST00000609674 331 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 AC104237.2-201ENST00000612456 443 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 AC079395.3-201ENST00000615161 484 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 AC006386.1-201ENST00000619436 415 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.21□□□□□ -1.9
RIPK4P57078 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.21□□□□□ -1.9
RIPK4P57078 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.21□□□□□ -1.9
RIPK4P57078 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.21□□□□□ -1.9
RIPK4P57078 AC111188.2-201ENST00000529697 1387 ntBASIC3.21□□□□□ -1.9
RIPK4P57078 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.21□□□□□ -1.9
RIPK4P57078 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RIPK4P57078 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RIPK4P57078 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
RIPK4P57078 AC116096.1-201ENST00000566804 2314 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RIPK4P57078 AC130650.2-201ENST00000618736 2403 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RIPK4P57078 RNU6-335P-201ENST00000364563 113 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 RNU6-730P-201ENST00000383954 104 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 SNORA36C-201ENST00000384289 132 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 AL592310.1-201ENST00000414330 671 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 RPS7P9-201ENST00000414704 586 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 FCF1P2-201ENST00000415284 583 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 AL096701.2-201ENST00000416920 238 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 VPS26BP1-201ENST00000417155 755 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 USP9YP21-201ENST00000420603 432 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
RIPK4P57078 NANOGP5-201ENST00000424456 877 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 Z93242.1-201ENST00000427102 353 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.2□□□□□ -1.9
RIPK4P57078 RPL21P112-201ENST00000434403 463 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 AL590103.1-201ENST00000434488 307 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.2□□□□□ -1.9
RIPK4P57078 AC068587.2-201ENST00000478386 781 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 MTCO3P35-201ENST00000485582 781 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.2□□□□□ -1.9
RIPK4P57078 MTCYBP35-201ENST00000503630 1137 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.2□□□□□ -1.9
RIPK4P57078 AC109471.1-201ENST00000511631 612 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RIPK4P57078 AP003122.3-201ENST00000526316 255 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.2□□□□□ -1.9
RIPK4P57078 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.2□□□□□ -1.9
RIPK4P57078 AL132857.1-201ENST00000555180 708 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.2□□□□□ -1.9
RIPK4P57078 MIR4513-201ENST00000581077 86 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.2□□□□□ -1.9
RIPK4P57078 SNRPGP15-201ENST00000600149 222 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 AC113368.1-201ENST00000603736 382 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 AC106052.1-201ENST00000608029 497 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 U73479.1-201ENST00000618062 168 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 AC104985.3-201ENST00000623479 597 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.2□□□□□ -1.9
RIPK4P57078 MTND4P34-201ENST00000572715 1371 ntBASIC3.2□□□□□ -1.9
RIPK4P57078 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RIPK4P57078 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.2□□□□□ -1.9
RIPK4P57078 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
RIPK4P57078 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RIPK4P57078 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.19□□□□□ -1.9
RIPK4P57078 SNORA7.2-201ENST00000364446 145 ntBASIC3.19□□□□□ -1.9
RIPK4P57078 RNU6-339P-201ENST00000384310 107 ntBASIC3.19□□□□□ -1.9
RIPK4P57078 RPL7P27-201ENST00000403775 720 ntBASIC3.19□□□□□ -1.9
RIPK4P57078 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.19□□□□□ -1.9
RIPK4P57078 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.19□□□□□ -1.9
RIPK4P57078 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms