Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL445435.1-201ENST00000604232 665 ntBASIC2.54□□□□□ -2
CLDN18P56856 AC107871.2-201ENST00000612894 502 ntBASIC2.54□□□□□ -2
CLDN18P56856 AL512506.1-201ENST00000613918 449 ntBASIC2.54□□□□□ -2
CLDN18P56856 UCA1.1-201ENST00000620952 75 ntBASIC2.54□□□□□ -2
CLDN18P56856 SCARNA15.3-201ENST00000626315 122 ntBASIC2.54□□□□□ -2
CLDN18P56856 SCARNA4.1-201ENST00000628597 123 ntBASIC2.54□□□□□ -2
CLDN18P56856 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CLDN18P56856 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CLDN18P56856 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLDN18P56856 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLDN18P56856 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.54□□□□□ -2
CLDN18P56856 SNORA5B-201ENST00000363786 132 ntBASIC2.53□□□□□ -2
CLDN18P56856 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLDN18P56856 Y_RNA.510-201ENST00000384511 114 ntBASIC2.53□□□□□ -2
CLDN18P56856 MIR512-1-201ENST00000384913 84 ntBASIC2.53□□□□□ -2
CLDN18P56856 RPS3AP24-201ENST00000407896 734 ntBASIC2.53□□□□□ -2
CLDN18P56856 AC027644.1-201ENST00000419595 298 ntBASIC2.53□□□□□ -2
CLDN18P56856 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.53□□□□□ -2
CLDN18P56856 AL512844.2-201ENST00000433990 593 ntBASIC2.53□□□□□ -2
CLDN18P56856 RNF2P1-201ENST00000442955 1010 ntBASIC2.53□□□□□ -2
CLDN18P56856 MTCYBP11-201ENST00000447254 1109 ntBASIC2.53□□□□□ -2
CLDN18P56856 AL353691.1-201ENST00000451332 387 ntBASIC2.53□□□□□ -2
CLDN18P56856 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.53□□□□□ -2
CLDN18P56856 AC026410.2-201ENST00000460281 156 ntBASIC2.53□□□□□ -2
CLDN18P56856 RPL23AP70-201ENST00000483361 460 ntBASIC2.53□□□□□ -2
CLDN18P56856 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.53□□□□□ -2
CLDN18P56856 AC117522.3-201ENST00000507974 584 ntBASIC2.53□□□□□ -2
CLDN18P56856 AC119751.5-201ENST00000514077 770 ntBASIC2.53□□□□□ -2
CLDN18P56856 RNU5A-7P-201ENST00000515979 116 ntBASIC2.53□□□□□ -2
CLDN18P56856 RNU6-1261P-201ENST00000517194 104 ntBASIC2.53□□□□□ -2
CLDN18P56856 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.53□□□□□ -2
CLDN18P56856 AP003066.2-201ENST00000529375 555 ntBASIC2.53□□□□□ -2
CLDN18P56856 AC079600.2-201ENST00000550076 130 ntBASIC2.53□□□□□ -2
CLDN18P56856 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.53□□□□□ -2
CLDN18P56856 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.53□□□□□ -2
CLDN18P56856 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.53□□□□□ -2
CLDN18P56856 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
CLDN18P56856 VN1R87P-201ENST00000596706 487 ntBASIC2.53□□□□□ -2
CLDN18P56856 AL161734.1-201ENST00000609720 557 ntBASIC2.53□□□□□ -2
CLDN18P56856 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLDN18P56856 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLDN18P56856 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
CLDN18P56856 AC008669.1-201ENST00000565823 2178 ntBASIC2.53□□□□□ -2
CLDN18P56856 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLDN18P56856 ZNF519P1-201ENST00000449011 1626 ntBASIC2.53□□□□□ -2
CLDN18P56856 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.53□□□□□ -2
CLDN18P56856 MTCO1P9-201ENST00000505577 1534 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN18P56856 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN18P56856 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN18P56856 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN18P56856 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN18P56856 AL365361.1-201ENST00000566942 3481 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 VTRNA1-1-201ENST00000363120 99 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 RNU1-109P-201ENST00000383960 147 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 MIR627-201ENST00000384979 97 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 AL592148.1-201ENST00000413568 445 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN18P56856 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN18P56856 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.52□□□□□ -2.01
CLDN18P56856 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN18P56856 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN18P56856 AC244505.3-201ENST00000454598 187 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 AC092155.2-201ENST00000454675 477 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 RPS15AP17-201ENST00000470598 390 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN18P56856 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN18P56856 AC114322.1-201ENST00000506771 926 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN18P56856 AC008628.1-201ENST00000508663 265 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 RNA5SP356-201ENST00000515972 94 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN18P56856 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.52□□□□□ -2.01
CLDN18P56856 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN18P56856 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.52□□□□□ -2.01
CLDN18P56856 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN18P56856 HMGB1P6-201ENST00000569046 646 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 AC138761.3-201ENST00000579993 334 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.52□□□□□ -2.01
CLDN18P56856 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN18P56856 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN18P56856 AC004853.1-201ENST00000604902 698 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 ATP1B3P1-201ENST00000605365 821 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 AC080013.4-201ENST00000607624 649 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 AL450472.3-201ENST00000615578 367 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 AC084824.4-201ENST00000620106 731 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 AC010338.1-201ENST00000621823 717 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 AC008443.7-201ENST00000622195 246 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 AC097714.1-201ENST00000511272 1647 ntBASIC2.52□□□□□ -2.01
CLDN18P56856 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.52□□□□□ -2.01
CLDN18P56856 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLDN18P56856 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN18P56856 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN18P56856 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CLDN18P56856 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CLDN18P56856 MIR506-201ENST00000384998 124 ntBASIC2.51□□□□□ -2.01
CLDN18P56856 AL603865.2-201ENST00000401679 213 ntBASIC2.51□□□□□ -2.01
CLDN18P56856 HMGN2P35-201ENST00000412164 270 ntBASIC2.51□□□□□ -2.01
CLDN18P56856 SPA17P1-201ENST00000416656 452 ntBASIC2.51□□□□□ -2.01
CLDN18P56856 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms