Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC245054.2-201ENST00000415639 319 ntBASIC3.26□□□□□ -1.89
VCPP55072 NUP35P1-201ENST00000422734 947 ntBASIC3.26□□□□□ -1.89
VCPP55072 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.26□□□□□ -1.89
VCPP55072 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.26□□□□□ -1.89
VCPP55072 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.26□□□□□ -1.89
VCPP55072 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.26□□□□□ -1.89
VCPP55072 UQCRHP3-201ENST00000451503 251 ntBASIC3.26□□□□□ -1.89
VCPP55072 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.26□□□□□ -1.89
VCPP55072 RN7SL75P-201ENST00000461926 281 ntBASIC3.26□□□□□ -1.89
VCPP55072 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.26□□□□□ -1.89
VCPP55072 RNA5SP367-201ENST00000516557 118 ntBASIC3.26□□□□□ -1.89
VCPP55072 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.26□□□□□ -1.89
VCPP55072 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.26□□□□□ -1.89
VCPP55072 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.26□□□□□ -1.89
VCPP55072 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.26□□□□□ -1.89
VCPP55072 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.26□□□□□ -1.89
VCPP55072 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.26□□□□□ -1.89
VCPP55072 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.26□□□□□ -1.89
VCPP55072 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.26□□□□□ -1.89
VCPP55072 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.26□□□□□ -1.89
VCPP55072 AC012669.1-201ENST00000603209 283 ntBASIC3.26□□□□□ -1.89
VCPP55072 CDR1-202ENST00000625883 1485 ntBASIC3.26□□□□□ -1.89
VCPP55072 AC008264.2-201ENST00000610193 3731 ntBASIC3.26□□□□□ -1.89
VCPP55072 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VCPP55072 AC000403.1-201ENST00000613696 3585 ntBASIC3.26□□□□□ -1.89
VCPP55072 AL049780.3-201ENST00000624612 1583 ntBASIC3.25□□□□□ -1.89
VCPP55072 GDI2P1-201ENST00000429312 1336 ntBASIC3.25□□□□□ -1.89
VCPP55072 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
VCPP55072 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
VCPP55072 DYNLT3P1-201ENST00000378574 347 ntBASIC3.25□□□□□ -1.89
VCPP55072 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
VCPP55072 SNORA7.4-201ENST00000384249 137 ntBASIC3.25□□□□□ -1.89
VCPP55072 RNU6-636P-201ENST00000384598 107 ntBASIC3.25□□□□□ -1.89
VCPP55072 SNORD67-201ENST00000390833 111 ntBASIC3.25□□□□□ -1.89
VCPP55072 RNU6-1242P-201ENST00000391052 103 ntBASIC3.25□□□□□ -1.89
VCPP55072 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.25□□□□□ -1.89
VCPP55072 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.25□□□□□ -1.89
VCPP55072 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.25□□□□□ -1.89
VCPP55072 SDCBPP3-201ENST00000419629 891 ntBASIC3.25□□□□□ -1.89
VCPP55072 RPL21P32-201ENST00000419877 477 ntBASIC3.25□□□□□ -1.89
VCPP55072 OR2B8P-201ENST00000432841 938 ntBASIC3.25□□□□□ -1.89
VCPP55072 AC105272.1-201ENST00000438604 198 ntBASIC3.25□□□□□ -1.89
VCPP55072 MTCYBP34-201ENST00000439552 670 ntBASIC3.25□□□□□ -1.89
VCPP55072 MTCO2P25-201ENST00000447065 681 ntBASIC3.25□□□□□ -1.89
VCPP55072 MTCYBP11-201ENST00000447254 1109 ntBASIC3.25□□□□□ -1.89
VCPP55072 MTND2P19-201ENST00000449129 1012 ntBASIC3.25□□□□□ -1.89
VCPP55072 AL109933.2-201ENST00000452651 260 ntBASIC3.25□□□□□ -1.89
VCPP55072 RNA5SP310-201ENST00000459084 116 ntBASIC3.25□□□□□ -1.89
VCPP55072 AC104472.2-201ENST00000469035 601 ntBASIC3.25□□□□□ -1.89
VCPP55072 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.25□□□□□ -1.89
VCPP55072 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.25□□□□□ -1.89
VCPP55072 AC026412.2-201ENST00000512270 1075 ntBASIC3.25□□□□□ -1.89
VCPP55072 AC114781.4-201ENST00000513707 639 ntBASIC3.25□□□□□ -1.89
VCPP55072 SNORA31.1-201ENST00000515993 133 ntBASIC3.25□□□□□ -1.89
VCPP55072 RNU1-41P-201ENST00000516161 162 ntBASIC3.25□□□□□ -1.89
VCPP55072 SNORA31.5-201ENST00000516190 133 ntBASIC3.25□□□□□ -1.89
VCPP55072 RNU1-48P-201ENST00000516400 162 ntBASIC3.25□□□□□ -1.89
VCPP55072 COX6CP8-201ENST00000522620 226 ntBASIC3.25□□□□□ -1.89
VCPP55072 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.25□□□□□ -1.89
VCPP55072 HIGD1AP17-201ENST00000554576 276 ntBASIC3.25□□□□□ -1.89
VCPP55072 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.25□□□□□ -1.89
VCPP55072 LARP7P2-201ENST00000575306 125 ntBASIC3.25□□□□□ -1.89
VCPP55072 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.25□□□□□ -1.89
VCPP55072 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.25□□□□□ -1.89
VCPP55072 AC009220.3-201ENST00000604318 586 ntBASIC3.25□□□□□ -1.89
VCPP55072 AC107075.1-201ENST00000613695 314 ntBASIC3.25□□□□□ -1.89
VCPP55072 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VCPP55072 AC091046.2-201ENST00000620775 665 ntBASIC3.25□□□□□ -1.89
VCPP55072 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VCPP55072 AC093831.2-201ENST00000624393 3427 ntBASIC3.25□□□□□ -1.89
VCPP55072 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.24□□□□□ -1.89
VCPP55072 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.24□□□□□ -1.89
VCPP55072 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
VCPP55072 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VCPP55072 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VCPP55072 SNRPEP3-201ENST00000338402 276 ntBASIC3.24□□□□□ -1.89
VCPP55072 SNORA71.1-201ENST00000364523 117 ntBASIC3.24□□□□□ -1.89
VCPP55072 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VCPP55072 SNRPEP2-201ENST00000397592 279 ntBASIC3.24□□□□□ -1.89
VCPP55072 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.24□□□□□ -1.89
VCPP55072 SSXP9-201ENST00000417503 292 ntBASIC3.24□□□□□ -1.89
VCPP55072 AC099677.1-201ENST00000420575 175 ntBASIC3.24□□□□□ -1.89
VCPP55072 AC003685.2-201ENST00000422795 395 ntBASIC3.24□□□□□ -1.89
VCPP55072 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.24□□□□□ -1.89
VCPP55072 AC022018.1-201ENST00000430685 241 ntBASIC3.24□□□□□ -1.89
VCPP55072 MYL8P-204ENST00000431574 518 ntBASIC3.24□□□□□ -1.89
VCPP55072 AC093156.1-201ENST00000440382 670 ntBASIC3.24□□□□□ -1.89
VCPP55072 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.24□□□□□ -1.89
VCPP55072 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.24□□□□□ -1.89
VCPP55072 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.24□□□□□ -1.89
VCPP55072 RPS20P22-201ENST00000473700 357 ntBASIC3.24□□□□□ -1.89
VCPP55072 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.24□□□□□ -1.89
VCPP55072 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.24□□□□□ -1.89
VCPP55072 HMGB1P28-201ENST00000507778 552 ntBASIC3.24□□□□□ -1.89
VCPP55072 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.24□□□□□ -1.89
VCPP55072 SNORA31.26-201ENST00000517250 137 ntBASIC3.24□□□□□ -1.89
VCPP55072 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.24□□□□□ -1.89
VCPP55072 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.24□□□□□ -1.89
VCPP55072 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.24□□□□□ -1.89
VCPP55072 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms