Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.15□□□□□ -1.91
SMSP52788 PAXBP1P1-201ENST00000449315 447 ntBASIC3.15□□□□□ -1.91
SMSP52788 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.15□□□□□ -1.91
SMSP52788 AC008155.2-201ENST00000464337 397 ntBASIC3.15□□□□□ -1.91
SMSP52788 HSPE1P6-201ENST00000479457 291 ntBASIC3.15□□□□□ -1.91
SMSP52788 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.15□□□□□ -1.91
SMSP52788 AC093809.1-201ENST00000509155 340 ntBASIC3.15□□□□□ -1.91
SMSP52788 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.15□□□□□ -1.91
SMSP52788 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.15□□□□□ -1.91
SMSP52788 AC026801.2-201ENST00000515352 425 ntBASIC3.15□□□□□ -1.91
SMSP52788 RNU1-103P-201ENST00000516502 125 ntBASIC3.15□□□□□ -1.91
SMSP52788 AC093331.1-201ENST00000521474 169 ntBASIC3.15□□□□□ -1.91
SMSP52788 UBTFL10-201ENST00000528532 562 ntBASIC3.15□□□□□ -1.91
SMSP52788 MIR4513-201ENST00000581077 86 ntBASIC3.15□□□□□ -1.91
SMSP52788 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.15□□□□□ -1.91
SMSP52788 AC092106.3-201ENST00000611308 722 ntBASIC3.15□□□□□ -1.91
SMSP52788 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.15□□□□□ -1.91
SMSP52788 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.15□□□□□ -1.91
SMSP52788 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.15□□□□□ -1.91
SMSP52788 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.15□□□□□ -1.91
SMSP52788 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.15□□□□□ -1.91
SMSP52788 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SMSP52788 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.15□□□□□ -1.91
SMSP52788 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMSP52788 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMSP52788 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SMSP52788 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMSP52788 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMSP52788 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SMSP52788 FRG1CP-201ENST00000358464 769 ntBASIC3.14□□□□□ -1.91
SMSP52788 RNU6-1078P-201ENST00000364522 103 ntBASIC3.14□□□□□ -1.91
SMSP52788 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMSP52788 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMSP52788 RNA5SP38-201ENST00000410750 119 ntBASIC3.14□□□□□ -1.91
SMSP52788 AL356968.1-201ENST00000416622 474 ntBASIC3.14□□□□□ -1.91
SMSP52788 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.14□□□□□ -1.91
SMSP52788 AL512649.1-201ENST00000428997 581 ntBASIC3.14□□□□□ -1.91
SMSP52788 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.14□□□□□ -1.91
SMSP52788 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.14□□□□□ -1.91
SMSP52788 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.14□□□□□ -1.91
SMSP52788 AC008264.1-201ENST00000447612 367 ntBASIC3.14□□□□□ -1.91
SMSP52788 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.14□□□□□ -1.91
SMSP52788 AC097262.1-201ENST00000452559 548 ntBASIC3.14□□□□□ -1.91
SMSP52788 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.14□□□□□ -1.91
SMSP52788 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.14□□□□□ -1.91
SMSP52788 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.14□□□□□ -1.91
SMSP52788 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.14□□□□□ -1.91
SMSP52788 AC034244.1-201ENST00000507687 207 ntBASIC3.14□□□□□ -1.91
SMSP52788 AC093281.2-201ENST00000510153 597 ntBASIC3.14□□□□□ -1.91
SMSP52788 AC119751.5-201ENST00000514077 770 ntBASIC3.14□□□□□ -1.91
SMSP52788 RNU6-415P-201ENST00000516252 97 ntBASIC3.14□□□□□ -1.91
SMSP52788 SNORA64.4-201ENST00000516632 81 ntBASIC3.14□□□□□ -1.91
SMSP52788 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.14□□□□□ -1.91
SMSP52788 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.14□□□□□ -1.91
SMSP52788 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.14□□□□□ -1.91
SMSP52788 UBE2NP1-201ENST00000545592 458 ntBASIC3.14□□□□□ -1.91
SMSP52788 SETP2-201ENST00000553886 926 ntBASIC3.14□□□□□ -1.91
SMSP52788 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMSP52788 AC136618.2-201ENST00000575091 400 ntBASIC3.14□□□□□ -1.91
SMSP52788 AC061975.8-201ENST00000587058 721 ntBASIC3.14□□□□□ -1.91
SMSP52788 AC012493.2-201ENST00000595083 291 ntBASIC3.14□□□□□ -1.91
SMSP52788 AC068313.1-201ENST00000604028 1008 ntBASIC3.14□□□□□ -1.91
SMSP52788 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.14□□□□□ -1.91
SMSP52788 AC009268.2-201ENST00000621925 457 ntBASIC3.14□□□□□ -1.91
SMSP52788 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.14□□□□□ -1.91
SMSP52788 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.14□□□□□ -1.91
SMSP52788 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMSP52788 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMSP52788 ZNF876P-202ENST00000398732 1485 ntBASIC3.14□□□□□ -1.91
SMSP52788 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMSP52788 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.13□□□□□ -1.91
SMSP52788 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMSP52788 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.13□□□□□ -1.91
SMSP52788 SNORD113-6-201ENST00000363345 75 ntBASIC3.13□□□□□ -1.91
SMSP52788 RNU5E-8P-201ENST00000363502 116 ntBASIC3.13□□□□□ -1.91
SMSP52788 SNORA36C-201ENST00000384289 132 ntBASIC3.13□□□□□ -1.91
SMSP52788 SNORA48.5-201ENST00000391143 135 ntBASIC3.13□□□□□ -1.91
SMSP52788 RNU6-754P-201ENST00000391166 107 ntBASIC3.13□□□□□ -1.91
SMSP52788 RPL22P18-201ENST00000417197 377 ntBASIC3.13□□□□□ -1.91
SMSP52788 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.13□□□□□ -1.91
SMSP52788 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.13□□□□□ -1.91
SMSP52788 AL356867.1-201ENST00000429623 299 ntBASIC3.13□□□□□ -1.91
SMSP52788 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.13□□□□□ -1.91
SMSP52788 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.13□□□□□ -1.91
SMSP52788 AC112653.1-201ENST00000443851 386 ntBASIC3.13□□□□□ -1.91
SMSP52788 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.13□□□□□ -1.91
SMSP52788 AC125238.1-201ENST00000448842 249 ntBASIC3.13□□□□□ -1.91
SMSP52788 AL049714.1-201ENST00000466686 347 ntBASIC3.13□□□□□ -1.91
SMSP52788 RPL30P14-201ENST00000482744 348 ntBASIC3.13□□□□□ -1.91
SMSP52788 HMGB1P36-201ENST00000487709 576 ntBASIC3.13□□□□□ -1.91
SMSP52788 RPL30P5-201ENST00000494923 336 ntBASIC3.13□□□□□ -1.91
SMSP52788 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMSP52788 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.13□□□□□ -1.91
SMSP52788 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SMSP52788 SNORA70.18-201ENST00000516696 98 ntBASIC3.13□□□□□ -1.91
SMSP52788 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.13□□□□□ -1.91
SMSP52788 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.13□□□□□ -1.91
SMSP52788 AC125611.2-201ENST00000551907 647 ntBASIC3.13□□□□□ -1.91
SMSP52788 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.13□□□□□ -1.91
SMSP52788 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms