Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.83□□□□□ -1.64
MRE11P49959 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.83□□□□□ -1.64
MRE11P49959 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.83□□□□□ -1.64
MRE11P49959 AC012314.7-201ENST00000619693 93 ntBASIC4.83□□□□□ -1.64
MRE11P49959 SCARNA15.3-201ENST00000626315 122 ntBASIC4.83□□□□□ -1.64
MRE11P49959 SCARNA4.1-201ENST00000628597 123 ntBASIC4.83□□□□□ -1.64
MRE11P49959 AC112487.2-201ENST00000637950 304 ntBASIC4.83□□□□□ -1.64
MRE11P49959 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MRE11P49959 ZNF137P-201ENST00000456718 1920 ntBASIC4.83□□□□□ -1.64
MRE11P49959 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.83□□□□□ -1.64
MRE11P49959 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
MRE11P49959 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
MRE11P49959 MAPK10-373ENST00000641983 6772 ntBASIC4.83□□□□□ -1.64
MRE11P49959 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MRE11P49959 PNPT1P2-201ENST00000456768 2050 ntBASIC4.82□□□□□ -1.64
MRE11P49959 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.82□□□□□ -1.64
MRE11P49959 AC024560.2-201ENST00000507981 1497 ntBASIC4.82□□□□□ -1.64
MRE11P49959 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MRE11P49959 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MRE11P49959 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.82□□□□□ -1.64
MRE11P49959 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.82□□□□□ -1.64
MRE11P49959 AC006026.1-201ENST00000444025 1803 ntBASIC4.82□□□□□ -1.64
MRE11P49959 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
MRE11P49959 RNU4-73P-201ENST00000363164 141 ntBASIC4.82□□□□□ -1.64
MRE11P49959 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.82□□□□□ -1.64
MRE11P49959 SNORA51.6-201ENST00000384151 125 ntBASIC4.82□□□□□ -1.64
MRE11P49959 RPL23AP32-201ENST00000395315 459 ntBASIC4.82□□□□□ -1.64
MRE11P49959 RPL31P1-201ENST00000398116 372 ntBASIC4.82□□□□□ -1.64
MRE11P49959 DSTNP4-201ENST00000399472 474 ntBASIC4.82□□□□□ -1.64
MRE11P49959 AL031679.1-201ENST00000400616 525 ntBASIC4.82□□□□□ -1.64
MRE11P49959 AC127391.1-201ENST00000411737 98 ntBASIC4.82□□□□□ -1.64
MRE11P49959 RPL23AP26-201ENST00000412728 464 ntBASIC4.82□□□□□ -1.64
MRE11P49959 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.82□□□□□ -1.64
MRE11P49959 HMGB3P12-201ENST00000438745 556 ntBASIC4.82□□□□□ -1.64
MRE11P49959 RPL23AP93-201ENST00000440847 484 ntBASIC4.82□□□□□ -1.64
MRE11P49959 FAM103A2P-201ENST00000444122 354 ntBASIC4.82□□□□□ -1.64
MRE11P49959 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.82□□□□□ -1.64
MRE11P49959 HMGB1P21-201ENST00000502313 581 ntBASIC4.82□□□□□ -1.64
MRE11P49959 Vault.3-201ENST00000516676 95 ntBASIC4.82□□□□□ -1.64
MRE11P49959 RNU6-714P-201ENST00000516963 103 ntBASIC4.82□□□□□ -1.64
MRE11P49959 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.82□□□□□ -1.64
MRE11P49959 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.82□□□□□ -1.64
MRE11P49959 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.82□□□□□ -1.64
MRE11P49959 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.82□□□□□ -1.64
MRE11P49959 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.82□□□□□ -1.64
MRE11P49959 HIF1AP1-201ENST00000553642 175 ntBASIC4.82□□□□□ -1.64
MRE11P49959 SUB1P2-201ENST00000556401 297 ntBASIC4.82□□□□□ -1.64
MRE11P49959 AC009101.1-201ENST00000568135 242 ntBASIC4.82□□□□□ -1.64
MRE11P49959 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.82□□□□□ -1.64
MRE11P49959 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.82□□□□□ -1.64
MRE11P49959 AC011468.4-201ENST00000603942 409 ntBASIC4.82□□□□□ -1.64
MRE11P49959 AC005034.5-201ENST00000604219 466 ntBASIC4.82□□□□□ -1.64
MRE11P49959 AL034351.1-201ENST00000605288 668 ntBASIC4.82□□□□□ -1.64
MRE11P49959 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.82□□□□□ -1.64
MRE11P49959 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.82□□□□□ -1.64
MRE11P49959 AL133173.2-201ENST00000614270 90 ntBASIC4.82□□□□□ -1.64
MRE11P49959 AC009233.1-201ENST00000616477 371 ntBASIC4.82□□□□□ -1.64
MRE11P49959 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
MRE11P49959 U7.8-201ENST00000619968 63 ntBASIC4.82□□□□□ -1.64
MRE11P49959 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.82□□□□□ -1.64
MRE11P49959 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MRE11P49959 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.82□□□□□ -1.64
MRE11P49959 AL049780.3-201ENST00000624612 1583 ntBASIC4.82□□□□□ -1.64
MRE11P49959 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
MRE11P49959 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
MRE11P49959 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.81□□□□□ -1.64
MRE11P49959 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
MRE11P49959 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MRE11P49959 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MRE11P49959 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
MRE11P49959 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
MRE11P49959 RNU6-1322P-201ENST00000364309 107 ntBASIC4.81□□□□□ -1.64
MRE11P49959 Y_RNA.356-201ENST00000365475 113 ntBASIC4.81□□□□□ -1.64
MRE11P49959 RNU6-744P-201ENST00000365557 107 ntBASIC4.81□□□□□ -1.64
MRE11P49959 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
MRE11P49959 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
MRE11P49959 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
MRE11P49959 RNU6-730P-201ENST00000383954 104 ntBASIC4.81□□□□□ -1.64
MRE11P49959 RNU6-1316P-201ENST00000384242 108 ntBASIC4.81□□□□□ -1.64
MRE11P49959 RNU6-878P-201ENST00000384578 110 ntBASIC4.81□□□□□ -1.64
MRE11P49959 AL356387.2-201ENST00000422272 243 ntBASIC4.81□□□□□ -1.64
MRE11P49959 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.81□□□□□ -1.64
MRE11P49959 AL031736.2-201ENST00000426573 787 ntBASIC4.81□□□□□ -1.64
MRE11P49959 OR51AB1P-201ENST00000429046 620 ntBASIC4.81□□□□□ -1.64
MRE11P49959 RPL7P54-201ENST00000438336 674 ntBASIC4.81□□□□□ -1.64
MRE11P49959 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.81□□□□□ -1.64
MRE11P49959 SNRPGP6-201ENST00000451124 220 ntBASIC4.81□□□□□ -1.64
MRE11P49959 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.81□□□□□ -1.64
MRE11P49959 RPS20P24-201ENST00000457473 361 ntBASIC4.81□□□□□ -1.64
MRE11P49959 RPL35AP15-201ENST00000468042 339 ntBASIC4.81□□□□□ -1.64
MRE11P49959 AC104563.1-201ENST00000476147 376 ntBASIC4.81□□□□□ -1.64
MRE11P49959 S100A11P1-201ENST00000477525 312 ntBASIC4.81□□□□□ -1.64
MRE11P49959 RPL36AP51-201ENST00000487216 318 ntBASIC4.81□□□□□ -1.64
MRE11P49959 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.81□□□□□ -1.64
MRE11P49959 AC110768.1-201ENST00000509222 400 ntBASIC4.81□□□□□ -1.64
MRE11P49959 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.81□□□□□ -1.64
MRE11P49959 RN7SKP13-201ENST00000515933 244 ntBASIC4.81□□□□□ -1.64
MRE11P49959 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.81□□□□□ -1.64
MRE11P49959 ZNF705CP-201ENST00000530515 889 ntBASIC4.81□□□□□ -1.64
MRE11P49959 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms