Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PRIM1P49642 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
PRIM1P49642 RNU6-701P-201ENST00000384059 107 ntBASIC6.83□□□□□ -1.32
PRIM1P49642 DDX39BP1-205ENST00000422507 192 ntBASIC6.83□□□□□ -1.32
PRIM1P49642 AC138761.5-201ENST00000433967 325 ntBASIC6.83□□□□□ -1.32
PRIM1P49642 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.83□□□□□ -1.32
PRIM1P49642 AL136097.1-201ENST00000456945 913 ntBASIC6.83□□□□□ -1.32
PRIM1P49642 RNU6-953P-201ENST00000459154 107 ntBASIC6.83□□□□□ -1.32
PRIM1P49642 RPS17P5-201ENST00000498293 408 ntBASIC6.83□□□□□ -1.32
PRIM1P49642 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.83□□□□□ -1.32
PRIM1P49642 Y_RNA.689-201ENST00000516589 107 ntBASIC6.83□□□□□ -1.32
PRIM1P49642 ERHP1-201ENST00000523006 310 ntBASIC6.83□□□□□ -1.32
PRIM1P49642 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.83□□□□□ -1.32
PRIM1P49642 AC004584.2-201ENST00000570407 410 ntBASIC6.83□□□□□ -1.32
PRIM1P49642 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.83□□□□□ -1.32
PRIM1P49642 AC012119.1-201ENST00000603184 222 ntBASIC6.83□□□□□ -1.32
PRIM1P49642 AC007566.2-201ENST00000603642 413 ntBASIC6.83□□□□□ -1.32
PRIM1P49642 AL160281.1-201ENST00000605307 311 ntBASIC6.83□□□□□ -1.32
PRIM1P49642 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PRIM1P49642 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.83□□□□□ -1.32
PRIM1P49642 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
PRIM1P49642 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
PRIM1P49642 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
PRIM1P49642 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
PRIM1P49642 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PRIM1P49642 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.82□□□□□ -1.32
PRIM1P49642 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.82□□□□□ -1.32
PRIM1P49642 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC6.82□□□□□ -1.32
PRIM1P49642 AP005435.3-201ENST00000531260 3198 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PRIM1P49642 Y_RNA.84-201ENST00000363011 104 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 SNORA62-201ENST00000365493 153 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PRIM1P49642 PCNPP3-201ENST00000393579 471 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 AL139039.1-201ENST00000401900 692 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 AL590704.1-201ENST00000402856 794 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 RPS15AP6-201ENST00000420703 385 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 UBE2D3P2-201ENST00000424409 445 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.82□□□□□ -1.32
PRIM1P49642 AC073063.1-201ENST00000434352 607 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.82□□□□□ -1.32
PRIM1P49642 RN7SL385P-201ENST00000468873 276 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC6.82□□□□□ -1.32
PRIM1P49642 RPL30P11-201ENST00000495304 339 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 RNU6-27P-201ENST00000516146 107 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.82□□□□□ -1.32
PRIM1P49642 CBX3P8-201ENST00000532412 525 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 AP006289.1-201ENST00000538089 277 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.82□□□□□ -1.32
PRIM1P49642 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC6.82□□□□□ -1.32
PRIM1P49642 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.82□□□□□ -1.32
PRIM1P49642 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.82□□□□□ -1.32
PRIM1P49642 AC083809.1-201ENST00000615051 472 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.82□□□□□ -1.32
PRIM1P49642 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC6.82□□□□□ -1.32
PRIM1P49642 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PRIM1P49642 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PRIM1P49642 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PRIM1P49642 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
PRIM1P49642 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PRIM1P49642 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PRIM1P49642 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PRIM1P49642 AC005183.1-201ENST00000603687 1979 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 AC079741.1-201ENST00000321498 212 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PRIM1P49642 RNU6-1159P-201ENST00000362933 107 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 RNA5SP428-201ENST00000365129 132 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PRIM1P49642 RNU6-933P-201ENST00000384424 107 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 RPS16P5-201ENST00000406501 404 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 RNA5SP36-201ENST00000410197 133 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 AL030996.1-201ENST00000411430 235 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 AL139156.1-201ENST00000412785 841 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 KNOP1P3-201ENST00000446933 426 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC6.81□□□□□ -1.32
PRIM1P49642 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.81□□□□□ -1.32
PRIM1P49642 Y_RNA.644-201ENST00000459006 113 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 RN7SL354P-201ENST00000469282 294 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 AC140172.1-201ENST00000502928 141 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 Y_RNA.674-201ENST00000516362 113 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.81□□□□□ -1.32
PRIM1P49642 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC6.81□□□□□ -1.32
PRIM1P49642 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.81□□□□□ -1.32
PRIM1P49642 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.81□□□□□ -1.32
PRIM1P49642 AC002044.1-201ENST00000606707 158 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 MIR4275-201ENST00000636486 87 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 HSPA8P4-201ENST00000511877 1920 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PRIM1P49642 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.81□□□□□ -1.32
PRIM1P49642 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PRIM1P49642 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
PRIM1P49642 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.81□□□□□ -1.32
PRIM1P49642 AL591135.1-201ENST00000401578 5914 ntBASIC6.81□□□□□ -1.32
PRIM1P49642 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.81□□□□□ -1.32
PRIM1P49642 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
PRIM1P49642 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PRIM1P49642 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
PRIM1P49642 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PRIM1P49642 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PRIM1P49642 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms