Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.63□□□□□ -1.83
HADHAP40939 AL158071.1-201ENST00000430315 461 ntBASIC3.63□□□□□ -1.83
HADHAP40939 MED14P1-201ENST00000430517 648 ntBASIC3.63□□□□□ -1.83
HADHAP40939 MTATP6P17-201ENST00000431030 672 ntBASIC3.63□□□□□ -1.83
HADHAP40939 GOT2P5-201ENST00000433995 546 ntBASIC3.63□□□□□ -1.83
HADHAP40939 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.63□□□□□ -1.83
HADHAP40939 LARP1BP3-201ENST00000437229 869 ntBASIC3.63□□□□□ -1.83
HADHAP40939 HIGD1AP11-201ENST00000438361 280 ntBASIC3.63□□□□□ -1.83
HADHAP40939 AL512286.1-201ENST00000439244 400 ntBASIC3.63□□□□□ -1.83
HADHAP40939 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.63□□□□□ -1.83
HADHAP40939 RPS3AP46-201ENST00000448352 682 ntBASIC3.63□□□□□ -1.83
HADHAP40939 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.63□□□□□ -1.83
HADHAP40939 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.63□□□□□ -1.83
HADHAP40939 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.63□□□□□ -1.83
HADHAP40939 HMGN2P13-201ENST00000476476 274 ntBASIC3.63□□□□□ -1.83
HADHAP40939 HSPE1P6-201ENST00000479457 291 ntBASIC3.63□□□□□ -1.83
HADHAP40939 RNU1-95P-201ENST00000516357 160 ntBASIC3.63□□□□□ -1.83
HADHAP40939 RNU1-128P-201ENST00000516704 160 ntBASIC3.63□□□□□ -1.83
HADHAP40939 RNU6-1003P-201ENST00000517099 105 ntBASIC3.63□□□□□ -1.83
HADHAP40939 SNORA31.22-201ENST00000517204 135 ntBASIC3.63□□□□□ -1.83
HADHAP40939 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.63□□□□□ -1.83
HADHAP40939 TGIF1P1-201ENST00000558095 802 ntBASIC3.63□□□□□ -1.83
HADHAP40939 AC091489.2-201ENST00000566263 604 ntBASIC3.63□□□□□ -1.83
HADHAP40939 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HADHAP40939 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.63□□□□□ -1.83
HADHAP40939 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.63□□□□□ -1.83
HADHAP40939 AL592295.2-201ENST00000612578 206 ntBASIC3.63□□□□□ -1.83
HADHAP40939 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.63□□□□□ -1.83
HADHAP40939 AL603758.1-201ENST00000618654 241 ntBASIC3.63□□□□□ -1.83
HADHAP40939 AC019226.1-201ENST00000625666 515 ntBASIC3.63□□□□□ -1.83
HADHAP40939 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.63□□□□□ -1.83
HADHAP40939 ZNF826P-207ENST00000622273 1910 ntBASIC3.63□□□□□ -1.83
HADHAP40939 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HADHAP40939 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HADHAP40939 AC092125.1-201ENST00000562568 1995 ntBASIC3.63□□□□□ -1.83
HADHAP40939 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.63□□□□□ -1.83
HADHAP40939 AL138713.1-201ENST00000624026 2130 ntBASIC3.62□□□□□ -1.83
HADHAP40939 CUL1P1-201ENST00000509510 2425 ntBASIC3.62□□□□□ -1.83
HADHAP40939 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HADHAP40939 RNU5A-1-201ENST00000362698 116 ntBASIC3.62□□□□□ -1.83
HADHAP40939 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
HADHAP40939 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.62□□□□□ -1.83
HADHAP40939 U8.11-201ENST00000384699 133 ntBASIC3.62□□□□□ -1.83
HADHAP40939 U8.12-201ENST00000384701 133 ntBASIC3.62□□□□□ -1.83
HADHAP40939 RNY3P9-201ENST00000384727 106 ntBASIC3.62□□□□□ -1.83
HADHAP40939 MIR7-3-201ENST00000384898 110 ntBASIC3.62□□□□□ -1.83
HADHAP40939 RN7SKP285-201ENST00000410137 318 ntBASIC3.62□□□□□ -1.83
HADHAP40939 RNA5SP44-201ENST00000410446 133 ntBASIC3.62□□□□□ -1.83
HADHAP40939 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.62□□□□□ -1.83
HADHAP40939 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.62□□□□□ -1.83
HADHAP40939 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.62□□□□□ -1.83
HADHAP40939 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.62□□□□□ -1.83
HADHAP40939 AL365184.2-201ENST00000431139 435 ntBASIC3.62□□□□□ -1.83
HADHAP40939 TXNP1-201ENST00000441872 371 ntBASIC3.62□□□□□ -1.83
HADHAP40939 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HADHAP40939 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.62□□□□□ -1.83
HADHAP40939 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.62□□□□□ -1.83
HADHAP40939 U8.18-201ENST00000459285 133 ntBASIC3.62□□□□□ -1.83
HADHAP40939 AC006499.5-201ENST00000505037 514 ntBASIC3.62□□□□□ -1.83
HADHAP40939 CBX3P3-201ENST00000508108 532 ntBASIC3.62□□□□□ -1.83
HADHAP40939 AC109464.2-201ENST00000510242 943 ntBASIC3.62□□□□□ -1.83
HADHAP40939 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.62□□□□□ -1.83
HADHAP40939 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.62□□□□□ -1.83
HADHAP40939 AC026403.1-201ENST00000518938 295 ntBASIC3.62□□□□□ -1.83
HADHAP40939 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.62□□□□□ -1.83
HADHAP40939 MIR3944-201ENST00000581277 108 ntBASIC3.62□□□□□ -1.83
HADHAP40939 AC106900.2-201ENST00000604994 317 ntBASIC3.62□□□□□ -1.83
HADHAP40939 AP003355.3-201ENST00000623465 114 ntBASIC3.62□□□□□ -1.83
HADHAP40939 AF246928.1-201ENST00000623768 87 ntBASIC3.62□□□□□ -1.83
HADHAP40939 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HADHAP40939 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HADHAP40939 MFSD8-236ENST00000641509 4050 ntBASIC3.61□□□□□ -1.83
HADHAP40939 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HADHAP40939 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HADHAP40939 RIOK3P1-201ENST00000418778 1528 ntBASIC3.61□□□□□ -1.83
HADHAP40939 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HADHAP40939 Y_RNA.97-201ENST00000363094 102 ntBASIC3.61□□□□□ -1.83
HADHAP40939 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.61□□□□□ -1.83
HADHAP40939 RNU6-1077P-201ENST00000410506 102 ntBASIC3.61□□□□□ -1.83
HADHAP40939 RNU6-920P-201ENST00000410926 92 ntBASIC3.61□□□□□ -1.83
HADHAP40939 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.61□□□□□ -1.83
HADHAP40939 AL590383.1-201ENST00000428602 75 ntBASIC3.61□□□□□ -1.83
HADHAP40939 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.61□□□□□ -1.83
HADHAP40939 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.61□□□□□ -1.83
HADHAP40939 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.61□□□□□ -1.83
HADHAP40939 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.61□□□□□ -1.83
HADHAP40939 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.61□□□□□ -1.83
HADHAP40939 SNORD105B-201ENST00000458770 79 ntBASIC3.61□□□□□ -1.83
HADHAP40939 AC023598.1-201ENST00000472521 361 ntBASIC3.61□□□□□ -1.83
HADHAP40939 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.61□□□□□ -1.83
HADHAP40939 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.61□□□□□ -1.83
HADHAP40939 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.61□□□□□ -1.83
HADHAP40939 SNORD59.2-201ENST00000516873 68 ntBASIC3.61□□□□□ -1.83
HADHAP40939 AC106038.2-201ENST00000520706 568 ntBASIC3.61□□□□□ -1.83
HADHAP40939 AP006245.1-201ENST00000522549 120 ntBASIC3.61□□□□□ -1.83
HADHAP40939 AC007991.1-201ENST00000522680 631 ntBASIC3.61□□□□□ -1.83
HADHAP40939 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.61□□□□□ -1.83
HADHAP40939 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.61□□□□□ -1.83
HADHAP40939 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.61□□□□□ -1.83
HADHAP40939 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms