Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
GDNFP39905 RNU4-42P-201ENST00000364738 142 ntBASIC4.56□□□□□ -1.68
GDNFP39905 AC005522.1-201ENST00000395416 346 ntBASIC4.56□□□□□ -1.68
GDNFP39905 RNU6-1156P-201ENST00000410365 100 ntBASIC4.56□□□□□ -1.68
GDNFP39905 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.56□□□□□ -1.68
GDNFP39905 AC108032.1-201ENST00000416706 207 ntBASIC4.56□□□□□ -1.68
GDNFP39905 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.56□□□□□ -1.68
GDNFP39905 AL137014.1-201ENST00000420490 1226 ntBASIC4.56□□□□□ -1.68
GDNFP39905 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.56□□□□□ -1.68
GDNFP39905 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.56□□□□□ -1.68
GDNFP39905 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.56□□□□□ -1.68
GDNFP39905 AL645568.3-201ENST00000433683 316 ntBASIC4.56□□□□□ -1.68
GDNFP39905 OR6D1P-201ENST00000436165 939 ntBASIC4.56□□□□□ -1.68
GDNFP39905 AC064862.4-201ENST00000442180 334 ntBASIC4.56□□□□□ -1.68
GDNFP39905 RPL21P103-201ENST00000479921 488 ntBASIC4.56□□□□□ -1.68
GDNFP39905 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.56□□□□□ -1.68
GDNFP39905 RNU6-397P-201ENST00000516226 104 ntBASIC4.56□□□□□ -1.68
GDNFP39905 Y_RNA.689-201ENST00000516589 107 ntBASIC4.56□□□□□ -1.68
GDNFP39905 SNORA40.15-201ENST00000516884 107 ntBASIC4.56□□□□□ -1.68
GDNFP39905 IGLVIV-53-201ENST00000520107 367 ntBASIC4.56□□□□□ -1.68
GDNFP39905 HMGN1P28-201ENST00000521340 364 ntBASIC4.56□□□□□ -1.68
GDNFP39905 AC100870.1-201ENST00000522035 505 ntBASIC4.56□□□□□ -1.68
GDNFP39905 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.56□□□□□ -1.68
GDNFP39905 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.56□□□□□ -1.68
GDNFP39905 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.56□□□□□ -1.68
GDNFP39905 AL049839.1-201ENST00000556151 657 ntBASIC4.56□□□□□ -1.68
GDNFP39905 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.56□□□□□ -1.68
GDNFP39905 AC010547.6-201ENST00000571789 193 ntBASIC4.56□□□□□ -1.68
GDNFP39905 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.56□□□□□ -1.68
GDNFP39905 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.56□□□□□ -1.68
GDNFP39905 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.56□□□□□ -1.68
GDNFP39905 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GDNFP39905 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GDNFP39905 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
GDNFP39905 AL031119.1-201ENST00000404707 1879 ntBASIC4.56□□□□□ -1.68
GDNFP39905 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GDNFP39905 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
GDNFP39905 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
GDNFP39905 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
GDNFP39905 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GDNFP39905 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GDNFP39905 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
GDNFP39905 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GDNFP39905 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
GDNFP39905 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
GDNFP39905 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.55□□□□□ -1.68
GDNFP39905 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GDNFP39905 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.55□□□□□ -1.68
GDNFP39905 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
GDNFP39905 RNA5SP46-201ENST00000362370 120 ntBASIC4.55□□□□□ -1.68
GDNFP39905 Y_RNA.48-201ENST00000362710 103 ntBASIC4.55□□□□□ -1.68
GDNFP39905 SNORA16A-201ENST00000384342 137 ntBASIC4.55□□□□□ -1.68
GDNFP39905 Y_RNA.551-201ENST00000384661 102 ntBASIC4.55□□□□□ -1.68
GDNFP39905 Y_RNA.577-201ENST00000384794 101 ntBASIC4.55□□□□□ -1.68
GDNFP39905 AC110754.1-201ENST00000399740 601 ntBASIC4.55□□□□□ -1.68
GDNFP39905 SYF2P2-201ENST00000417620 583 ntBASIC4.55□□□□□ -1.68
GDNFP39905 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GDNFP39905 AP000281.1-201ENST00000444036 316 ntBASIC4.55□□□□□ -1.68
GDNFP39905 AC007967.1-201ENST00000455422 1159 ntBASIC4.55□□□□□ -1.68
GDNFP39905 FTH1P2-201ENST00000466086 412 ntBASIC4.55□□□□□ -1.68
GDNFP39905 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.55□□□□□ -1.68
GDNFP39905 AC011005.2-201ENST00000487324 359 ntBASIC4.55□□□□□ -1.68
GDNFP39905 AC004453.1-201ENST00000487895 408 ntBASIC4.55□□□□□ -1.68
GDNFP39905 AC093852.1-201ENST00000503587 266 ntBASIC4.55□□□□□ -1.68
GDNFP39905 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.55□□□□□ -1.68
GDNFP39905 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.55□□□□□ -1.68
GDNFP39905 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.55□□□□□ -1.68
GDNFP39905 AC007991.1-201ENST00000522680 631 ntBASIC4.55□□□□□ -1.68
GDNFP39905 AC022080.3-201ENST00000544433 482 ntBASIC4.55□□□□□ -1.68
GDNFP39905 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.55□□□□□ -1.68
GDNFP39905 IGBP1P1-201ENST00000554337 1009 ntBASIC4.55□□□□□ -1.68
GDNFP39905 AC090517.1-201ENST00000569307 266 ntBASIC4.55□□□□□ -1.68
GDNFP39905 AC006600.1-201ENST00000572529 153 ntBASIC4.55□□□□□ -1.68
GDNFP39905 MIR3614-201ENST00000581261 86 ntBASIC4.55□□□□□ -1.68
GDNFP39905 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.55□□□□□ -1.68
GDNFP39905 AC012433.1-201ENST00000588916 398 ntBASIC4.55□□□□□ -1.68
GDNFP39905 AL031176.1-201ENST00000604554 466 ntBASIC4.55□□□□□ -1.68
GDNFP39905 AC110801.1-201ENST00000623590 212 ntBASIC4.55□□□□□ -1.68
GDNFP39905 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GDNFP39905 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
GDNFP39905 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GDNFP39905 AC023421.1-201ENST00000590535 1785 ntBASIC4.55□□□□□ -1.68
GDNFP39905 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
GDNFP39905 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
GDNFP39905 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
GDNFP39905 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GDNFP39905 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GDNFP39905 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
GDNFP39905 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GDNFP39905 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
GDNFP39905 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.54□□□□□ -1.68
GDNFP39905 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
GDNFP39905 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GDNFP39905 Y_RNA.150-201ENST00000363562 102 ntBASIC4.54□□□□□ -1.68
GDNFP39905 RNA5SP435-201ENST00000364044 108 ntBASIC4.54□□□□□ -1.68
GDNFP39905 RNA5SP223-201ENST00000365174 120 ntBASIC4.54□□□□□ -1.68
GDNFP39905 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
GDNFP39905 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GDNFP39905 Y_RNA.462-201ENST00000384268 102 ntBASIC4.54□□□□□ -1.68
GDNFP39905 Y_RNA.785-201ENST00000384290 109 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms