Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 CR848007.1-201ENST00000442354 1699 ntBASIC1.54□□□□□ -2.16
SNCAP37840 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SNCAP37840 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SNCAP37840 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SNCAP37840 AL450338.1-201ENST00000407987 512 ntBASIC1.53□□□□□ -2.16
SNCAP37840 VN1R51P-201ENST00000411675 945 ntBASIC1.53□□□□□ -2.16
SNCAP37840 MTCO3P12-201ENST00000416718 547 ntBASIC1.53□□□□□ -2.16
SNCAP37840 AL445685.2-201ENST00000422551 342 ntBASIC1.53□□□□□ -2.16
SNCAP37840 DPH3P2-201ENST00000422618 250 ntBASIC1.53□□□□□ -2.16
SNCAP37840 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC1.53□□□□□ -2.16
SNCAP37840 AL365496.1-201ENST00000426885 215 ntBASIC1.53□□□□□ -2.16
SNCAP37840 AL590762.3-201ENST00000436372 640 ntBASIC1.53□□□□□ -2.16
SNCAP37840 AC096638.1-201ENST00000444678 216 ntBASIC1.53□□□□□ -2.16
SNCAP37840 HMGN1P5-201ENST00000448591 263 ntBASIC1.53□□□□□ -2.16
SNCAP37840 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.53□□□□□ -2.16
SNCAP37840 HMGB1P26-201ENST00000452520 628 ntBASIC1.53□□□□□ -2.16
SNCAP37840 AC092155.2-201ENST00000454675 477 ntBASIC1.53□□□□□ -2.16
SNCAP37840 NAP1L1P3-201ENST00000462291 880 ntBASIC1.53□□□□□ -2.16
SNCAP37840 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SNCAP37840 AC034222.1-201ENST00000494052 532 ntBASIC1.53□□□□□ -2.16
SNCAP37840 OR52A4P-203ENST00000498233 1014 ntBASIC1.53□□□□□ -2.16
SNCAP37840 AC105252.1-201ENST00000503089 286 ntBASIC1.53□□□□□ -2.16
SNCAP37840 AC069306.1-201ENST00000507006 843 ntBASIC1.53□□□□□ -2.16
SNCAP37840 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.53□□□□□ -2.16
SNCAP37840 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SNCAP37840 AC133963.2-201ENST00000513686 578 ntBASIC1.53□□□□□ -2.16
SNCAP37840 AC017037.2-201ENST00000513850 890 ntBASIC1.53□□□□□ -2.16
SNCAP37840 AC022634.1-201ENST00000520765 532 ntBASIC1.53□□□□□ -2.16
SNCAP37840 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.53□□□□□ -2.16
SNCAP37840 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.53□□□□□ -2.16
SNCAP37840 GLYCAM1-201ENST00000546596 285 ntBASIC1.53□□□□□ -2.16
SNCAP37840 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.53□□□□□ -2.16
SNCAP37840 AP005205.1-201ENST00000563503 508 ntBASIC1.53□□□□□ -2.16
SNCAP37840 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.53□□□□□ -2.16
SNCAP37840 AC090312.2-201ENST00000582687 378 ntBASIC1.53□□□□□ -2.16
SNCAP37840 MIR548Y-201ENST00000582739 110 ntBASIC1.53□□□□□ -2.16
SNCAP37840 MIR3616-201ENST00000584070 92 ntBASIC1.53□□□□□ -2.16
SNCAP37840 AL158801.5-201ENST00000623123 465 ntBASIC1.53□□□□□ -2.16
SNCAP37840 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SNCAP37840 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SNCAP37840 AC087359.1-201ENST00000508335 1740 ntBASIC1.52□□□□□ -2.17
SNCAP37840 AC123912.3-201ENST00000600907 1367 ntBASIC1.52□□□□□ -2.17
SNCAP37840 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SNCAP37840 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.52□□□□□ -2.17
SNCAP37840 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SNCAP37840 RNU6-185P-201ENST00000384421 107 ntBASIC1.52□□□□□ -2.17
SNCAP37840 SNORA64-201ENST00000384674 134 ntBASIC1.52□□□□□ -2.17
SNCAP37840 AC019129.1-201ENST00000403786 261 ntBASIC1.52□□□□□ -2.17
SNCAP37840 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.52□□□□□ -2.17
SNCAP37840 AL445646.1-201ENST00000431784 216 ntBASIC1.52□□□□□ -2.17
SNCAP37840 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.52□□□□□ -2.17
SNCAP37840 IFNA20P-201ENST00000436840 528 ntBASIC1.52□□□□□ -2.17
SNCAP37840 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.52□□□□□ -2.17
SNCAP37840 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.52□□□□□ -2.17
SNCAP37840 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SNCAP37840 AL359385.1-201ENST00000456509 365 ntBASIC1.52□□□□□ -2.17
SNCAP37840 ATG12P2-201ENST00000456830 416 ntBASIC1.52□□□□□ -2.17
SNCAP37840 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.52□□□□□ -2.17
SNCAP37840 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.52□□□□□ -2.17
SNCAP37840 RPL7P18-201ENST00000478965 734 ntBASIC1.52□□□□□ -2.17
SNCAP37840 RPL9P6-201ENST00000492764 598 ntBASIC1.52□□□□□ -2.17
SNCAP37840 COL6A4P2-205ENST00000509855 506 ntBASIC1.52□□□□□ -2.17
SNCAP37840 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SNCAP37840 BTF3P12-201ENST00000519620 469 ntBASIC1.52□□□□□ -2.17
SNCAP37840 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.52□□□□□ -2.17
SNCAP37840 AC007375.1-201ENST00000554513 578 ntBASIC1.52□□□□□ -2.17
SNCAP37840 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.52□□□□□ -2.17
SNCAP37840 AC090666.1-201ENST00000578241 445 ntBASIC1.52□□□□□ -2.17
SNCAP37840 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.52□□□□□ -2.17
SNCAP37840 AC011471.1-201ENST00000585766 187 ntBASIC1.52□□□□□ -2.17
SNCAP37840 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.52□□□□□ -2.17
SNCAP37840 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.52□□□□□ -2.17
SNCAP37840 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.52□□□□□ -2.17
SNCAP37840 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.52□□□□□ -2.17
SNCAP37840 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.52□□□□□ -2.17
SNCAP37840 AL162233.1-201ENST00000620014 944 ntBASIC1.52□□□□□ -2.17
SNCAP37840 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SNCAP37840 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SNCAP37840 Y_RNA.62-201ENST00000362840 99 ntBASIC1.51□□□□□ -2.17
SNCAP37840 RNU6-525P-201ENST00000363685 104 ntBASIC1.51□□□□□ -2.17
SNCAP37840 SNORA16.1-201ENST00000364597 132 ntBASIC1.51□□□□□ -2.17
SNCAP37840 SNORA67.3-201ENST00000384366 140 ntBASIC1.51□□□□□ -2.17
SNCAP37840 AL023284.1-201ENST00000403956 276 ntBASIC1.51□□□□□ -2.17
SNCAP37840 RNU2-20P-201ENST00000410425 191 ntBASIC1.51□□□□□ -2.17
SNCAP37840 RNA5SP508-201ENST00000411327 119 ntBASIC1.51□□□□□ -2.17
SNCAP37840 AC105402.1-201ENST00000413336 545 ntBASIC1.51□□□□□ -2.17
SNCAP37840 SNORD56-201ENST00000413522 71 ntBASIC1.51□□□□□ -2.17
SNCAP37840 BTF3P9-201ENST00000418784 283 ntBASIC1.51□□□□□ -2.17
SNCAP37840 AC007560.1-201ENST00000426912 237 ntBASIC1.51□□□□□ -2.17
SNCAP37840 AC009414.1-201ENST00000427200 443 ntBASIC1.51□□□□□ -2.17
SNCAP37840 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.51□□□□□ -2.17
SNCAP37840 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.51□□□□□ -2.17
SNCAP37840 OSTCP8-201ENST00000445117 448 ntBASIC1.51□□□□□ -2.17
SNCAP37840 AC128713.1-201ENST00000471495 306 ntBASIC1.51□□□□□ -2.17
SNCAP37840 RPS27P26-201ENST00000494583 239 ntBASIC1.51□□□□□ -2.17
SNCAP37840 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.51□□□□□ -2.17
SNCAP37840 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
SNCAP37840 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.51□□□□□ -2.17
SNCAP37840 AP002812.4-201ENST00000532139 286 ntBASIC1.51□□□□□ -2.17
SNCAP37840 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms