Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.24□□□□□ -1.89
CHRNA3P32297 AC108734.1-201ENST00000439549 399 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AL591719.1-201ENST00000444669 744 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AC140076.1-201ENST00000449897 361 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.24□□□□□ -1.89
CHRNA3P32297 RPL21P8-201ENST00000465083 535 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 MTND2P14-201ENST00000482139 351 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AC108860.1-201ENST00000484521 383 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.24□□□□□ -1.89
CHRNA3P32297 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.24□□□□□ -1.89
CHRNA3P32297 HMGB1P28-201ENST00000507778 552 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.24□□□□□ -1.89
CHRNA3P32297 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.24□□□□□ -1.89
CHRNA3P32297 MTND2P38-201ENST00000522536 667 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AC022861.1-201ENST00000522981 663 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.24□□□□□ -1.89
CHRNA3P32297 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.24□□□□□ -1.89
CHRNA3P32297 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.24□□□□□ -1.89
CHRNA3P32297 AC090888.2-201ENST00000559765 1144 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AC005951.1-201ENST00000576706 485 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.24□□□□□ -1.89
CHRNA3P32297 AC015688.2-201ENST00000584523 262 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.24□□□□□ -1.89
CHRNA3P32297 AL133393.1-201ENST00000603277 287 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AC025811.1-201ENST00000604312 472 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AC005000.2-201ENST00000605468 310 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AC007349.4-201ENST00000608114 532 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AL138880.2-201ENST00000616214 239 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AC138932.5-201ENST00000617759 563 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AL355493.4-201ENST00000618530 292 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AL596245.1-201ENST00000618994 362 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AC022509.4-201ENST00000621404 572 ntBASIC3.24□□□□□ -1.89
CHRNA3P32297 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
CHRNA3P32297 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CHRNA3P32297 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.24□□□□□ -1.89
CHRNA3P32297 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CHRNA3P32297 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
CHRNA3P32297 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CHRNA3P32297 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.23□□□□□ -1.89
CHRNA3P32297 DEFB108F-201ENST00000344638 222 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 SNORA14A-201ENST00000364773 135 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 SNORA48.2-201ENST00000390926 124 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 AF228730.1-201ENST00000397972 663 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 AC110754.1-201ENST00000399740 601 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 SSXP9-201ENST00000417503 292 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.23□□□□□ -1.89
CHRNA3P32297 AC005005.2-201ENST00000420779 380 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 AC012498.1-201ENST00000424037 437 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 TRIAP1P1-201ENST00000427062 225 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 TRIM60P18-201ENST00000441518 828 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 AL671855.1-201ENST00000446875 1203 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 AC007327.1-201ENST00000447461 264 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 AL359385.1-201ENST00000456509 365 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHRNA3P32297 AC006445.1-201ENST00000491925 405 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 VN1R104P-201ENST00000505115 1009 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
CHRNA3P32297 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.23□□□□□ -1.89
CHRNA3P32297 DEFB108D-201ENST00000527787 222 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 UBTFL10-201ENST00000528532 562 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.23□□□□□ -1.89
CHRNA3P32297 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.23□□□□□ -1.89
CHRNA3P32297 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.23□□□□□ -1.89
CHRNA3P32297 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.23□□□□□ -1.89
CHRNA3P32297 AC023813.2-201ENST00000564321 469 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 MIR3921-201ENST00000577308 85 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 AC022662.1-201ENST00000580252 331 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 AP001269.3-201ENST00000588718 329 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.23□□□□□ -1.89
CHRNA3P32297 NIFKP6-201ENST00000598115 845 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 AC021749.1-201ENST00000604322 607 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 AC004853.1-201ENST00000604902 698 ntBASIC3.23□□□□□ -1.89
CHRNA3P32297 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.23□□□□□ -1.89
CHRNA3P32297 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHRNA3P32297 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.23□□□□□ -1.89
CHRNA3P32297 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.23□□□□□ -1.89
CHRNA3P32297 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
CHRNA3P32297 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHRNA3P32297 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.23□□□□□ -1.89
CHRNA3P32297 AC005539.1-201ENST00000443768 1479 ntBASIC3.22□□□□□ -1.89
CHRNA3P32297 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHRNA3P32297 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHRNA3P32297 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHRNA3P32297 SNORD113-6-201ENST00000363345 75 ntBASIC3.22□□□□□ -1.89
CHRNA3P32297 RNU6-413P-201ENST00000384115 107 ntBASIC3.22□□□□□ -1.89
CHRNA3P32297 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
CHRNA3P32297 BMS1P22-201ENST00000414726 313 ntBASIC3.22□□□□□ -1.89
CHRNA3P32297 MRPL50P2-201ENST00000416821 482 ntBASIC3.22□□□□□ -1.89
CHRNA3P32297 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.22□□□□□ -1.89
CHRNA3P32297 MTCO2P5-201ENST00000422621 426 ntBASIC3.22□□□□□ -1.89
CHRNA3P32297 RPL7P34-201ENST00000433316 712 ntBASIC3.22□□□□□ -1.89
CHRNA3P32297 AC024082.2-201ENST00000434771 238 ntBASIC3.22□□□□□ -1.89
CHRNA3P32297 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.22□□□□□ -1.89
CHRNA3P32297 AC005410.1-202ENST00000460347 485 ntBASIC3.22□□□□□ -1.89
CHRNA3P32297 RPS29P2-201ENST00000479278 136 ntBASIC3.22□□□□□ -1.89
CHRNA3P32297 AC034244.1-201ENST00000507687 207 ntBASIC3.22□□□□□ -1.89
CHRNA3P32297 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CHRNA3P32297 AC022483.1-201ENST00000514020 567 ntBASIC3.22□□□□□ -1.89
CHRNA3P32297 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms