Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC092192.1-201ENST00000633154 1018 ntBASIC3.66□□□□□ -1.82
HOXC13P31276 CRYM-AS1-204ENST00000637983 556 ntBASIC3.66□□□□□ -1.82
HOXC13P31276 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXC13P31276 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC13P31276 ZNF542P-204ENST00000482727 1305 ntBASIC3.66□□□□□ -1.82
HOXC13P31276 TAB3P1-202ENST00000452645 1634 ntBASIC3.66□□□□□ -1.82
HOXC13P31276 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXC13P31276 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.65□□□□□ -1.82
HOXC13P31276 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.65□□□□□ -1.82
HOXC13P31276 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HOXC13P31276 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HOXC13P31276 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXC13P31276 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HOXC13P31276 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXC13P31276 Y_RNA.192-201ENST00000363977 102 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 Y_RNA.201-201ENST00000364052 96 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HOXC13P31276 AL031679.1-201ENST00000400616 525 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 DHFRP6-201ENST00000401776 268 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 AL356131.1-201ENST00000405826 414 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXC13P31276 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC13P31276 AC127526.1-201ENST00000417526 366 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 RPL30P16-201ENST00000419341 429 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 AC002075.2-201ENST00000425207 252 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 AC007742.1-201ENST00000425789 329 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC13P31276 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC13P31276 ELOCP26-201ENST00000436067 329 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 UBE2D3P1-201ENST00000436669 444 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC13P31276 AC091862.1-201ENST00000438016 1100 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXC13P31276 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXC13P31276 AC023598.1-201ENST00000472521 361 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 RPS3AP50-201ENST00000487064 803 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 AC023424.2-201ENST00000493479 777 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC13P31276 AC109927.2-201ENST00000506416 303 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC13P31276 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC13P31276 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC13P31276 AC105185.1-201ENST00000518705 535 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC13P31276 CR383656.7-201ENST00000548164 174 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 DUXAP6-201ENST00000553858 601 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXC13P31276 AC022662.1-201ENST00000580252 331 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXC13P31276 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC13P31276 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC13P31276 AC131235.4-201ENST00000609288 620 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
HOXC13P31276 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC13P31276 AC093648.1-201ENST00000623546 606 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 AL603839.4-201ENST00000624658 1005 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC13P31276 AC116618.1-201ENST00000634617 774 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 AC073073.2-201ENST00000609827 2578 ntBASIC3.65□□□□□ -1.83
HOXC13P31276 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXC13P31276 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.65□□□□□ -1.83
HOXC13P31276 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXC13P31276 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
HOXC13P31276 AC007496.3-201ENST00000624987 3443 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 AC068647.1-201ENST00000489539 2265 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HOXC13P31276 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HOXC13P31276 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HOXC13P31276 DEFB108F-201ENST00000344638 222 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 Y_RNA.51-201ENST00000362725 102 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 RNA5SP374-201ENST00000362939 125 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 RNA5SP139-201ENST00000364340 117 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXC13P31276 SNORA48.5-201ENST00000391143 135 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 U3.42-201ENST00000408746 214 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXC13P31276 BEND7P1-201ENST00000422058 457 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC13P31276 AC118469.1-201ENST00000442943 488 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 RPS29P31-201ENST00000446147 164 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 PTENP1-201ENST00000447117 1215 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 AL133217.1-201ENST00000450980 425 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC13P31276 RPL21P134-201ENST00000453468 483 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 AC097493.1-201ENST00000463958 372 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXC13P31276 AC068724.1-201ENST00000487100 792 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 RN7SL504P-201ENST00000494496 287 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC13P31276 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC13P31276 AL359273.1-201ENST00000510918 627 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC13P31276 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXC13P31276 RNY4P37-201ENST00000516225 96 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXC13P31276 OR5AK1P-201ENST00000524837 922 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HOXC13P31276 DEFB108D-201ENST00000527787 222 ntBASIC3.64□□□□□ -1.83
HOXC13P31276 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms