Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.96□□□□□ -1.94
XRCC1P18887 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.96□□□□□ -1.94
XRCC1P18887 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.96□□□□□ -1.94
XRCC1P18887 AL451007.1-201ENST00000595491 289 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 VN1R92P-201ENST00000598511 928 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 AC012443.1-201ENST00000605605 231 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.96□□□□□ -1.94
XRCC1P18887 AC131235.4-201ENST00000609288 620 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.96□□□□□ -1.94
XRCC1P18887 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
XRCC1P18887 TAB3P1-202ENST00000452645 1634 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 DDX43P2-201ENST00000604753 1354 ntBASIC2.96□□□□□ -1.94
XRCC1P18887 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
XRCC1P18887 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
XRCC1P18887 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 RNU6-882P-201ENST00000391025 103 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 RNU1-101P-201ENST00000391171 127 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 AL031121.1-201ENST00000406553 254 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 MIR1284-201ENST00000408337 120 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.95□□□□□ -1.94
XRCC1P18887 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.95□□□□□ -1.94
XRCC1P18887 HSPE1P1-201ENST00000421494 318 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.95□□□□□ -1.94
XRCC1P18887 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.95□□□□□ -1.94
XRCC1P18887 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.95□□□□□ -1.94
XRCC1P18887 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.95□□□□□ -1.94
XRCC1P18887 AL009048.1-201ENST00000450437 298 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.95□□□□□ -1.94
XRCC1P18887 RNU7-136P-201ENST00000458819 69 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 RPS23P3-201ENST00000470993 430 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 RN7SL633P-201ENST00000488974 297 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.95□□□□□ -1.94
XRCC1P18887 GTF2IP9-201ENST00000502460 301 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.95□□□□□ -1.94
XRCC1P18887 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.95□□□□□ -1.94
XRCC1P18887 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.95□□□□□ -1.94
XRCC1P18887 RNY4P37-201ENST00000516225 96 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.95□□□□□ -1.94
XRCC1P18887 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.95□□□□□ -1.94
XRCC1P18887 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
XRCC1P18887 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.95□□□□□ -1.94
XRCC1P18887 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.95□□□□□ -1.94
XRCC1P18887 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.95□□□□□ -1.94
XRCC1P18887 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.95□□□□□ -1.94
XRCC1P18887 AL022099.1-201ENST00000604551 712 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 AL390208.1-201ENST00000605885 644 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 AC097478.2-201ENST00000610572 514 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 AC069234.5-201ENST00000611056 416 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 AL445264.1-201ENST00000621719 171 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 AC116618.1-201ENST00000634617 774 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.95□□□□□ -1.94
XRCC1P18887 ZNF807-201ENST00000328088 1707 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
XRCC1P18887 AC090740.1-201ENST00000623193 2262 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
XRCC1P18887 AL035425.3-201ENST00000564206 4996 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.95□□□□□ -1.94
XRCC1P18887 AC092435.3-201ENST00000565538 3654 ntBASIC2.95□□□□□ -1.94
XRCC1P18887 AC108206.1-201ENST00000570186 4159 ntBASIC2.94□□□□□ -1.94
XRCC1P18887 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
XRCC1P18887 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
XRCC1P18887 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
XRCC1P18887 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.94□□□□□ -1.94
XRCC1P18887 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
XRCC1P18887 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
XRCC1P18887 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.94□□□□□ -1.94
XRCC1P18887 FRG1BP-201ENST00000278882 761 ntBASIC2.94□□□□□ -1.94
XRCC1P18887 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
XRCC1P18887 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
XRCC1P18887 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
XRCC1P18887 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.94□□□□□ -1.94
XRCC1P18887 AC013410.2-201ENST00000422627 201 ntBASIC2.94□□□□□ -1.94
XRCC1P18887 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.94□□□□□ -1.94
XRCC1P18887 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.94□□□□□ -1.94
XRCC1P18887 RABEPKP1-201ENST00000440529 1026 ntBASIC2.94□□□□□ -1.94
XRCC1P18887 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.94□□□□□ -1.94
XRCC1P18887 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.94□□□□□ -1.94
XRCC1P18887 USP9YP10-201ENST00000454868 628 ntBASIC2.94□□□□□ -1.94
XRCC1P18887 RPS26P21-201ENST00000475397 348 ntBASIC2.94□□□□□ -1.94
XRCC1P18887 AC080014.1-201ENST00000496877 1201 ntBASIC2.94□□□□□ -1.94
XRCC1P18887 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
XRCC1P18887 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.94□□□□□ -1.94
XRCC1P18887 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.94□□□□□ -1.94
XRCC1P18887 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.94□□□□□ -1.94
XRCC1P18887 AC007536.1-201ENST00000533382 349 ntBASIC2.94□□□□□ -1.94
XRCC1P18887 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.94□□□□□ -1.94
XRCC1P18887 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.94□□□□□ -1.94
XRCC1P18887 MED28P6-201ENST00000558776 231 ntBASIC2.94□□□□□ -1.94
XRCC1P18887 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.94□□□□□ -1.94
XRCC1P18887 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.94□□□□□ -1.94
XRCC1P18887 BNIP3P40-201ENST00000596017 556 ntBASIC2.94□□□□□ -1.94
XRCC1P18887 AC245297.2-201ENST00000610119 565 ntBASIC2.94□□□□□ -1.94
XRCC1P18887 ATP5A1P2-202ENST00000616464 443 ntBASIC2.94□□□□□ -1.94
XRCC1P18887 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.94□□□□□ -1.94
XRCC1P18887 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
XRCC1P18887 AL513185.3-201ENST00000433335 1300 ntBASIC2.93□□□□□ -1.94
XRCC1P18887 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
XRCC1P18887 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
XRCC1P18887 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms