Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 Y_RNA.212-201ENST00000364177 102 ntBASIC5.41□□□□□ -1.54
LIG1P18858 RNU6-641P-201ENST00000384006 107 ntBASIC5.41□□□□□ -1.54
LIG1P18858 Y_RNA.452-201ENST00000384202 108 ntBASIC5.41□□□□□ -1.54
LIG1P18858 MIR568-201ENST00000385036 95 ntBASIC5.41□□□□□ -1.54
LIG1P18858 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIG1P18858 SSXP10-201ENST00000402595 565 ntBASIC5.41□□□□□ -1.54
LIG1P18858 HMGN1P24-201ENST00000412282 298 ntBASIC5.41□□□□□ -1.54
LIG1P18858 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.41□□□□□ -1.54
LIG1P18858 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.41□□□□□ -1.54
LIG1P18858 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.41□□□□□ -1.54
LIG1P18858 EZH2P1-201ENST00000431167 291 ntBASIC5.41□□□□□ -1.54
LIG1P18858 FABP5P14-201ENST00000437273 393 ntBASIC5.41□□□□□ -1.54
LIG1P18858 SNORD121B-201ENST00000458838 81 ntBASIC5.41□□□□□ -1.54
LIG1P18858 AC079804.1-201ENST00000461922 436 ntBASIC5.41□□□□□ -1.54
LIG1P18858 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.41□□□□□ -1.54
LIG1P18858 AC068305.1-201ENST00000497406 726 ntBASIC5.41□□□□□ -1.54
LIG1P18858 PTP4A1P4-201ENST00000512479 322 ntBASIC5.41□□□□□ -1.54
LIG1P18858 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.41□□□□□ -1.54
LIG1P18858 HMGB1P41-201ENST00000520234 440 ntBASIC5.41□□□□□ -1.54
LIG1P18858 COX6CP5-201ENST00000527162 228 ntBASIC5.41□□□□□ -1.54
LIG1P18858 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.41□□□□□ -1.54
LIG1P18858 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.41□□□□□ -1.54
LIG1P18858 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.41□□□□□ -1.54
LIG1P18858 IMMP1LP2-201ENST00000552954 492 ntBASIC5.41□□□□□ -1.54
LIG1P18858 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIG1P18858 AC020910.3-201ENST00000603701 874 ntBASIC5.41□□□□□ -1.54
LIG1P18858 AC007938.3-201ENST00000604965 623 ntBASIC5.41□□□□□ -1.54
LIG1P18858 AC091979.2-201ENST00000607514 214 ntBASIC5.41□□□□□ -1.54
LIG1P18858 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.41□□□□□ -1.54
LIG1P18858 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LIG1P18858 AC099669.2-201ENST00000616549 437 ntBASIC5.41□□□□□ -1.54
LIG1P18858 uc_338.34-201ENST00000617467 174 ntBASIC5.41□□□□□ -1.54
LIG1P18858 RMST_9.1-201ENST00000619945 193 ntBASIC5.41□□□□□ -1.54
LIG1P18858 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.41□□□□□ -1.54
LIG1P18858 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.41□□□□□ -1.54
LIG1P18858 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.41□□□□□ -1.54
LIG1P18858 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.41□□□□□ -1.54
LIG1P18858 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.41□□□□□ -1.54
LIG1P18858 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.41□□□□□ -1.54
LIG1P18858 MTND5P10-201ENST00000603719 1809 ntBASIC5.41□□□□□ -1.54
LIG1P18858 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LIG1P18858 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
LIG1P18858 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LIG1P18858 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LIG1P18858 PNPT1P2-201ENST00000456768 2050 ntBASIC5.4□□□□□ -1.54
LIG1P18858 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.4□□□□□ -1.54
LIG1P18858 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LIG1P18858 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LIG1P18858 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LIG1P18858 SNORD113-7-201ENST00000363762 77 ntBASIC5.4□□□□□ -1.54
LIG1P18858 RNU6-1188P-201ENST00000363795 107 ntBASIC5.4□□□□□ -1.54
LIG1P18858 RNU6-82P-201ENST00000363970 107 ntBASIC5.4□□□□□ -1.54
LIG1P18858 Y_RNA.378-201ENST00000365652 113 ntBASIC5.4□□□□□ -1.54
LIG1P18858 MIR124-3-201ENST00000384866 87 ntBASIC5.4□□□□□ -1.54
LIG1P18858 RNU6-1106P-201ENST00000390845 107 ntBASIC5.4□□□□□ -1.54
LIG1P18858 RNU6-278P-201ENST00000390945 109 ntBASIC5.4□□□□□ -1.54
LIG1P18858 RNU6-1304P-201ENST00000411374 106 ntBASIC5.4□□□□□ -1.54
LIG1P18858 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.4□□□□□ -1.54
LIG1P18858 AL049745.1-201ENST00000433953 286 ntBASIC5.4□□□□□ -1.54
LIG1P18858 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.4□□□□□ -1.54
LIG1P18858 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.4□□□□□ -1.54
LIG1P18858 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.4□□□□□ -1.54
LIG1P18858 RN7SL817P-201ENST00000480777 288 ntBASIC5.4□□□□□ -1.54
LIG1P18858 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.4□□□□□ -1.54
LIG1P18858 AL139099.1-201ENST00000497398 403 ntBASIC5.4□□□□□ -1.54
LIG1P18858 HMGB1P21-201ENST00000502313 581 ntBASIC5.4□□□□□ -1.54
LIG1P18858 AC017037.1-201ENST00000508460 471 ntBASIC5.4□□□□□ -1.54
LIG1P18858 RNU6-1137P-201ENST00000517073 99 ntBASIC5.4□□□□□ -1.54
LIG1P18858 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.4□□□□□ -1.54
LIG1P18858 AC109635.4-202ENST00000531666 412 ntBASIC5.4□□□□□ -1.54
LIG1P18858 OR5D15P-201ENST00000531671 942 ntBASIC5.4□□□□□ -1.54
LIG1P18858 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.4□□□□□ -1.54
LIG1P18858 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.4□□□□□ -1.54
LIG1P18858 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.4□□□□□ -1.54
LIG1P18858 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.4□□□□□ -1.54
LIG1P18858 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
LIG1P18858 MIR5690-201ENST00000583739 73 ntBASIC5.4□□□□□ -1.54
LIG1P18858 MIR3149-201ENST00000584629 83 ntBASIC5.4□□□□□ -1.54
LIG1P18858 AC010680.4-201ENST00000605334 543 ntBASIC5.4□□□□□ -1.54
LIG1P18858 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.4□□□□□ -1.54
LIG1P18858 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.4□□□□□ -1.54
LIG1P18858 AC140113.4-201ENST00000622087 222 ntBASIC5.4□□□□□ -1.54
LIG1P18858 AC007792.1-201ENST00000623023 402 ntBASIC5.4□□□□□ -1.54
LIG1P18858 AL133243.3-201ENST00000617415 3004 ntBASIC5.4□□□□□ -1.55
LIG1P18858 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.4□□□□□ -1.55
LIG1P18858 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.4□□□□□ -1.55
LIG1P18858 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
LIG1P18858 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
LIG1P18858 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
LIG1P18858 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.4□□□□□ -1.55
LIG1P18858 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
LIG1P18858 AC011978.2-201ENST00000569835 2054 ntBASIC5.39□□□□□ -1.55
LIG1P18858 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
LIG1P18858 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LIG1P18858 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.39□□□□□ -1.55
LIG1P18858 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.39□□□□□ -1.55
LIG1P18858 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LIG1P18858 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
LIG1P18858 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.39□□□□□ -1.55
LIG1P18858 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms