Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.63□□□□□ -2.15
HMGA1P17096 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMGA1P17096 Z75741.2-201ENST00000417272 1167 ntBASIC1.63□□□□□ -2.15
HMGA1P17096 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.63□□□□□ -2.15
HMGA1P17096 MORF4L1P7-201ENST00000426038 703 ntBASIC1.63□□□□□ -2.15
HMGA1P17096 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HMGA1P17096 BNIP3P2-201ENST00000441221 577 ntBASIC1.63□□□□□ -2.15
HMGA1P17096 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.63□□□□□ -2.15
HMGA1P17096 AC011753.1-201ENST00000451001 220 ntBASIC1.63□□□□□ -2.15
HMGA1P17096 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGA1P17096 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGA1P17096 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGA1P17096 AC108729.3-201ENST00000513484 108 ntBASIC1.63□□□□□ -2.15
HMGA1P17096 RN7SKP5-201ENST00000517045 272 ntBASIC1.63□□□□□ -2.15
HMGA1P17096 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGA1P17096 PTP4A1P6-201ENST00000531034 478 ntBASIC1.63□□□□□ -2.15
HMGA1P17096 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGA1P17096 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGA1P17096 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGA1P17096 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.63□□□□□ -2.15
HMGA1P17096 AC068831.7-201ENST00000616954 363 ntBASIC1.63□□□□□ -2.15
HMGA1P17096 AL158801.5-201ENST00000623123 465 ntBASIC1.63□□□□□ -2.15
HMGA1P17096 AC098679.5-201ENST00000624394 571 ntBASIC1.63□□□□□ -2.15
HMGA1P17096 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
HMGA1P17096 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.63□□□□□ -2.15
HMGA1P17096 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.62□□□□□ -2.15
HMGA1P17096 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
HMGA1P17096 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.62□□□□□ -2.15
HMGA1P17096 RNU4-13P-201ENST00000364019 141 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 CCNB2P1-201ENST00000399411 1150 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 FGF7P8-201ENST00000402994 292 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 RPS3AP9-201ENST00000417027 792 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.62□□□□□ -2.15
HMGA1P17096 MTCO3P21-201ENST00000430791 643 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 RPS7P2-201ENST00000435134 607 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGA1P17096 AC025181.1-201ENST00000477507 416 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 MTCO2P32-201ENST00000514865 403 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 RNU6-1053P-201ENST00000515930 101 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.62□□□□□ -2.15
HMGA1P17096 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.62□□□□□ -2.15
HMGA1P17096 SUB1P3-201ENST00000564581 315 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.62□□□□□ -2.15
HMGA1P17096 MIR4448-201ENST00000584360 86 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 BX248123.2-201ENST00000606318 124 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 AL512598.1-201ENST00000610158 273 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 AC068944.2-201ENST00000610373 403 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 AC007275.1-201ENST00000621243 671 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 MFSD8-245ENST00000641743 948 ntBASIC1.62□□□□□ -2.15
HMGA1P17096 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMGA1P17096 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMGA1P17096 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
HMGA1P17096 Y_RNA.4-201ENST00000362333 112 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 MIR517C-201ENST00000385103 95 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 AC092447.6-201ENST00000414578 210 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.61□□□□□ -2.15
HMGA1P17096 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.61□□□□□ -2.15
HMGA1P17096 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
HMGA1P17096 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.61□□□□□ -2.15
HMGA1P17096 RNU1-61P-201ENST00000516107 151 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.61□□□□□ -2.15
HMGA1P17096 AC126177.3-201ENST00000551839 688 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMGA1P17096 AC015720.1-201ENST00000565251 277 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 AL670379.6-201ENST00000603753 252 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 AL670379.11-201ENST00000604059 253 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 AL670379.10-201ENST00000604330 253 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 AC008162.1-201ENST00000604718 254 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 AL670379.1-201ENST00000604752 252 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 AL670379.2-201ENST00000604983 252 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 AL670379.5-201ENST00000605253 252 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 AL670379.4-201ENST00000605279 254 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 AL670379.12-201ENST00000605291 253 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 AL670379.8-201ENST00000605353 252 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 AL670379.9-201ENST00000605428 253 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 AL670379.7-201ENST00000605823 252 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.61□□□□□ -2.15
HMGA1P17096 AC026241.1-201ENST00000517873 2142 ntBASIC1.61□□□□□ -2.15
HMGA1P17096 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.6□□□□□ -2.15
HMGA1P17096 AL596028.1-201ENST00000326971 197 ntBASIC1.6□□□□□ -2.15
HMGA1P17096 SNORA67.6-201ENST00000391093 99 ntBASIC1.6□□□□□ -2.15
HMGA1P17096 RNU6-174P-201ENST00000410406 106 ntBASIC1.6□□□□□ -2.15
HMGA1P17096 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.6□□□□□ -2.15
HMGA1P17096 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.6□□□□□ -2.15
HMGA1P17096 AC146507.1-201ENST00000468335 354 ntBASIC1.6□□□□□ -2.15
HMGA1P17096 RPS29P20-201ENST00000489592 171 ntBASIC1.6□□□□□ -2.15
HMGA1P17096 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.6□□□□□ -2.15
HMGA1P17096 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.6□□□□□ -2.15
HMGA1P17096 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.6□□□□□ -2.15
HMGA1P17096 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMGA1P17096 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.6□□□□□ -2.15
HMGA1P17096 AC245128.3-201ENST00000594721 748 ntBASIC1.6□□□□□ -2.15
HMGA1P17096 APOOP1-201ENST00000604695 592 ntBASIC1.6□□□□□ -2.15
HMGA1P17096 MIR6840-201ENST00000611937 71 ntBASIC1.6□□□□□ -2.15
HMGA1P17096 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.6□□□□□ -2.15
HMGA1P17096 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMGA1P17096 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
HMGA1P17096 AC131280.1-202ENST00000624067 4211 ntBASIC1.59□□□□□ -2.15
HMGA1P17096 AL589994.1-201ENST00000404962 340 ntBASIC1.59□□□□□ -2.15
HMGA1P17096 RNU6-321P-201ENST00000410912 106 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms