Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 SGO1P2-201ENST00000429458 1589 ntBASIC3.28□□□□□ -1.88
KRT3P12035 MTCO1P9-201ENST00000505577 1534 ntBASIC3.28□□□□□ -1.88
KRT3P12035 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KRT3P12035 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KRT3P12035 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRT3P12035 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.27□□□□□ -1.89
KRT3P12035 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KRT3P12035 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
KRT3P12035 FRG1BP-201ENST00000278882 761 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AL161781.1-201ENST00000354277 403 ntBASIC3.27□□□□□ -1.89
KRT3P12035 MIR148B-201ENST00000362252 99 ntBASIC3.27□□□□□ -1.89
KRT3P12035 RNU6-173P-201ENST00000364215 104 ntBASIC3.27□□□□□ -1.89
KRT3P12035 RNU6-343P-201ENST00000364709 104 ntBASIC3.27□□□□□ -1.89
KRT3P12035 RNU6-1207P-201ENST00000384343 107 ntBASIC3.27□□□□□ -1.89
KRT3P12035 SNORD15B-201ENST00000384714 146 ntBASIC3.27□□□□□ -1.89
KRT3P12035 MIR34B-201ENST00000385076 84 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AL590084.2-201ENST00000401481 382 ntBASIC3.27□□□□□ -1.89
KRT3P12035 CYCSP45-201ENST00000402289 315 ntBASIC3.27□□□□□ -1.89
KRT3P12035 NDUFB4P5-201ENST00000415445 361 ntBASIC3.27□□□□□ -1.89
KRT3P12035 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT3P12035 AL389915.1-201ENST00000422463 466 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AL353678.1-201ENST00000422735 741 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AC012498.1-201ENST00000424037 437 ntBASIC3.27□□□□□ -1.89
KRT3P12035 UBE2D3P2-201ENST00000424409 445 ntBASIC3.27□□□□□ -1.89
KRT3P12035 RPL7P46-201ENST00000425129 740 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AL008629.1-201ENST00000438615 184 ntBASIC3.27□□□□□ -1.89
KRT3P12035 THAP5P1-201ENST00000439089 262 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AL121871.1-201ENST00000443413 436 ntBASIC3.27□□□□□ -1.89
KRT3P12035 RPL36AP33-201ENST00000450395 310 ntBASIC3.27□□□□□ -1.89
KRT3P12035 RPL23AP31-201ENST00000456160 467 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AC072039.1-201ENST00000477611 581 ntBASIC3.27□□□□□ -1.89
KRT3P12035 LINC00888-204ENST00000487386 421 ntBASIC3.27□□□□□ -1.89
KRT3P12035 RN7SL283P-201ENST00000489055 303 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AC096751.1-202ENST00000502691 1067 ntBASIC3.27□□□□□ -1.89
KRT3P12035 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.27□□□□□ -1.89
KRT3P12035 AC034159.1-201ENST00000513885 583 ntBASIC3.27□□□□□ -1.89
KRT3P12035 SNORD59.2-201ENST00000516873 68 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.27□□□□□ -1.89
KRT3P12035 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.27□□□□□ -1.89
KRT3P12035 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT3P12035 AC022690.1-201ENST00000526681 550 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.27□□□□□ -1.89
KRT3P12035 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.27□□□□□ -1.89
KRT3P12035 MTND3P12-201ENST00000559068 328 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.27□□□□□ -1.89
KRT3P12035 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.27□□□□□ -1.89
KRT3P12035 BNIP3P23-201ENST00000599655 511 ntBASIC3.27□□□□□ -1.89
KRT3P12035 BDH2P1-201ENST00000602288 736 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AL139344.1-201ENST00000605228 195 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AC103710.4-201ENST00000609301 899 ntBASIC3.27□□□□□ -1.89
KRT3P12035 VIS1.1-201ENST00000610517 203 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AL357080.1-201ENST00000617394 239 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AC244100.1-202ENST00000621554 382 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AC099506.2-201ENST00000623074 221 ntBASIC3.27□□□□□ -1.89
KRT3P12035 AP002791.1-201ENST00000623291 381 ntBASIC3.27□□□□□ -1.89
KRT3P12035 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KRT3P12035 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
KRT3P12035 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.26□□□□□ -1.89
KRT3P12035 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
KRT3P12035 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRT3P12035 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT3P12035 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
KRT3P12035 RPL21P132-201ENST00000331267 462 ntBASIC3.26□□□□□ -1.89
KRT3P12035 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
KRT3P12035 Y_RNA.18-201ENST00000362461 102 ntBASIC3.26□□□□□ -1.89
KRT3P12035 SNORD113-6-201ENST00000363345 75 ntBASIC3.26□□□□□ -1.89
KRT3P12035 RNU6-931P-201ENST00000363850 107 ntBASIC3.26□□□□□ -1.89
KRT3P12035 RNU6-723P-201ENST00000383973 107 ntBASIC3.26□□□□□ -1.89
KRT3P12035 MIR23B-201ENST00000384832 97 ntBASIC3.26□□□□□ -1.89
KRT3P12035 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRT3P12035 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.26□□□□□ -1.89
KRT3P12035 AC234781.2-201ENST00000426370 994 ntBASIC3.26□□□□□ -1.89
KRT3P12035 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT3P12035 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.26□□□□□ -1.89
KRT3P12035 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.26□□□□□ -1.89
KRT3P12035 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.26□□□□□ -1.89
KRT3P12035 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.26□□□□□ -1.89
KRT3P12035 OR6C5P-201ENST00000452388 923 ntBASIC3.26□□□□□ -1.89
KRT3P12035 USP9YP10-201ENST00000454868 628 ntBASIC3.26□□□□□ -1.89
KRT3P12035 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.26□□□□□ -1.89
KRT3P12035 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT3P12035 AC104563.1-201ENST00000476147 376 ntBASIC3.26□□□□□ -1.89
KRT3P12035 MTND2P14-201ENST00000482139 351 ntBASIC3.26□□□□□ -1.89
KRT3P12035 AP001025.2-201ENST00000490908 477 ntBASIC3.26□□□□□ -1.89
KRT3P12035 AL358832.1-201ENST00000497800 389 ntBASIC3.26□□□□□ -1.89
KRT3P12035 HSPE1P23-201ENST00000509838 286 ntBASIC3.26□□□□□ -1.89
KRT3P12035 AC105914.1-201ENST00000511798 226 ntBASIC3.26□□□□□ -1.89
KRT3P12035 RNU6-714P-201ENST00000516963 103 ntBASIC3.26□□□□□ -1.89
KRT3P12035 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.26□□□□□ -1.89
KRT3P12035 COX6CP8-201ENST00000522620 226 ntBASIC3.26□□□□□ -1.89
KRT3P12035 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KRT3P12035 AC090888.2-201ENST00000559765 1144 ntBASIC3.26□□□□□ -1.89
KRT3P12035 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.26□□□□□ -1.89
KRT3P12035 AC034268.2-201ENST00000571784 482 ntBASIC3.26□□□□□ -1.89
KRT3P12035 UBL5P2-201ENST00000583788 219 ntBASIC3.26□□□□□ -1.89
KRT3P12035 MIR4999-201ENST00000585029 91 ntBASIC3.26□□□□□ -1.89
KRT3P12035 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.26□□□□□ -1.89
KRT3P12035 AC011451.2-201ENST00000604303 598 ntBASIC3.26□□□□□ -1.89
KRT3P12035 AC090186.1-201ENST00000605991 572 ntBASIC3.26□□□□□ -1.89
KRT3P12035 AC069200.1-201ENST00000609511 323 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms