Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC022616.6-201ENST00000520479 119 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.62□□□□□ -1.67
SNRPA1P09661 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.62□□□□□ -1.67
SNRPA1P09661 AC107016.1-201ENST00000550463 337 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 HMGB1P33-201ENST00000563485 527 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.62□□□□□ -1.67
SNRPA1P09661 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.62□□□□□ -1.67
SNRPA1P09661 NRBF2P1-201ENST00000587407 859 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.62□□□□□ -1.67
SNRPA1P09661 AC055876.5-201ENST00000605667 259 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 AC011816.2-201ENST00000607089 556 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 RNU6-87P-201ENST00000607561 108 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 AL355365.1-201ENST00000616480 294 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 CYP3A51P-201ENST00000633513 256 ntBASIC4.62□□□□□ -1.67
SNRPA1P09661 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SNRPA1P09661 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.62□□□□□ -1.67
SNRPA1P09661 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNRPA1P09661 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNRPA1P09661 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SNRPA1P09661 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
SNRPA1P09661 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.62□□□□□ -1.67
SNRPA1P09661 AC068254.2-201ENST00000623938 3577 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.61□□□□□ -1.67
SNRPA1P09661 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.61□□□□□ -1.67
SNRPA1P09661 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.61□□□□□ -1.67
SNRPA1P09661 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SNRPA1P09661 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SNRPA1P09661 Y_RNA.70-201ENST00000362886 110 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 SNORA72.1-201ENST00000363485 129 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 RNU6-1243P-201ENST00000364028 107 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 SNORD74.4-201ENST00000364129 80 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SNRPA1P09661 MIR491-201ENST00000384877 84 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 RPL31P1-201ENST00000398116 372 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 MTHFD2P2-201ENST00000407725 247 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SNRPA1P09661 AC009237.5-201ENST00000414271 501 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AL158156.1-201ENST00000422509 473 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SNRPA1P09661 AC002486.1-201ENST00000435098 391 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 SNRPEP8-201ENST00000442866 260 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AC112653.1-201ENST00000443851 386 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 RPS20P32-201ENST00000456044 356 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AC034222.1-201ENST00000494052 532 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.61□□□□□ -1.67
SNRPA1P09661 AC010493.1-201ENST00000513479 292 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AC104057.1-201ENST00000515547 497 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 RN7SKP209-201ENST00000516888 304 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 SNORA70.24-201ENST00000517233 118 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.61□□□□□ -1.67
SNRPA1P09661 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.61□□□□□ -1.67
SNRPA1P09661 AL161713.1-201ENST00000555538 145 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.61□□□□□ -1.67
SNRPA1P09661 AC107954.1-201ENST00000565906 727 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 MIR4458-201ENST00000578872 75 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.61□□□□□ -1.67
SNRPA1P09661 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.61□□□□□ -1.67
SNRPA1P09661 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.61□□□□□ -1.67
SNRPA1P09661 AC245014.2-201ENST00000603689 287 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AC246785.4-201ENST00000605374 287 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AC025253.1-201ENST00000613623 543 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AL442067.2-201ENST00000614033 363 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AC002553.4-201ENST00000616896 331 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AC233309.1-201ENST00000619522 751 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 DUXAP9-208ENST00000622815 614 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AC091953.5-201ENST00000622919 233 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AC022140.2-201ENST00000623500 188 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AC091905.1-201ENST00000624400 311 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.61□□□□□ -1.67
SNRPA1P09661 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.61□□□□□ -1.67
SNRPA1P09661 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.61□□□□□ -1.67
SNRPA1P09661 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SNRPA1P09661 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.61□□□□□ -1.67
SNRPA1P09661 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SNRPA1P09661 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
SNRPA1P09661 AC090229.1-201ENST00000590983 1609 ntBASIC4.61□□□□□ -1.67
SNRPA1P09661 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SNRPA1P09661 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.61□□□□□ -1.67
SNRPA1P09661 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.6□□□□□ -1.67
SNRPA1P09661 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNRPA1P09661 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNRPA1P09661 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNRPA1P09661 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNRPA1P09661 RNU6-694P-201ENST00000364071 147 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 RNU1-33P-201ENST00000364249 162 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SNRPA1P09661 SSXP10-201ENST00000402595 565 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 AC078974.1-201ENST00000411597 223 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SNRPA1P09661 MTATP6P27-201ENST00000416987 621 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 AL139413.1-201ENST00000421309 217 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 MTCO2P5-201ENST00000422621 426 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 AL035410.1-201ENST00000427409 427 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 TIMM9P3-201ENST00000428659 274 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 AC104850.1-201ENST00000435940 476 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 MTND5P20-201ENST00000448677 143 ntBASIC4.6□□□□□ -1.67
SNRPA1P09661 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.6□□□□□ -1.67
SNRPA1P09661 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.6□□□□□ -1.67
SNRPA1P09661 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms