Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RHOP08100 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.16□□□□□ -1.74
RHOP08100 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.16□□□□□ -1.74
RHOP08100 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
RHOP08100 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
RHOP08100 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RHOP08100 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.15□□□□□ -1.74
RHOP08100 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RHOP08100 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RHOP08100 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
RHOP08100 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
RHOP08100 Y_RNA.61-201ENST00000362835 102 ntBASIC4.15□□□□□ -1.75
RHOP08100 RNU6-1120P-201ENST00000362988 108 ntBASIC4.15□□□□□ -1.75
RHOP08100 RNU6-1097P-201ENST00000363586 107 ntBASIC4.15□□□□□ -1.75
RHOP08100 RNA5SP399-201ENST00000364003 117 ntBASIC4.15□□□□□ -1.75
RHOP08100 SNORD46.1-201ENST00000364139 104 ntBASIC4.15□□□□□ -1.75
RHOP08100 Y_RNA.279-201ENST00000364763 95 ntBASIC4.15□□□□□ -1.75
RHOP08100 RNA5SP97-201ENST00000365006 84 ntBASIC4.15□□□□□ -1.75
RHOP08100 RNU6-761P-201ENST00000384148 107 ntBASIC4.15□□□□□ -1.75
RHOP08100 OR51A5P-201ENST00000415429 942 ntBASIC4.15□□□□□ -1.75
RHOP08100 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.15□□□□□ -1.75
RHOP08100 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.15□□□□□ -1.75
RHOP08100 AC006548.1-201ENST00000427470 102 ntBASIC4.15□□□□□ -1.75
RHOP08100 AC119618.1-201ENST00000434191 222 ntBASIC4.15□□□□□ -1.75
RHOP08100 RPL7P54-201ENST00000438336 674 ntBASIC4.15□□□□□ -1.75
RHOP08100 HMGB3P12-201ENST00000438745 556 ntBASIC4.15□□□□□ -1.75
RHOP08100 AC127537.2-201ENST00000439258 465 ntBASIC4.15□□□□□ -1.75
RHOP08100 NANOGP10-201ENST00000453325 895 ntBASIC4.15□□□□□ -1.75
RHOP08100 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.15□□□□□ -1.75
RHOP08100 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.15□□□□□ -1.75
RHOP08100 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.15□□□□□ -1.75
RHOP08100 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.15□□□□□ -1.75
RHOP08100 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.15□□□□□ -1.75
RHOP08100 AC018710.1-201ENST00000506509 158 ntBASIC4.15□□□□□ -1.75
RHOP08100 AC025465.4-201ENST00000513422 638 ntBASIC4.15□□□□□ -1.75
RHOP08100 AC090572.1-201ENST00000519251 160 ntBASIC4.15□□□□□ -1.75
RHOP08100 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RHOP08100 RAB11AP2-201ENST00000545905 639 ntBASIC4.15□□□□□ -1.75
RHOP08100 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.15□□□□□ -1.75
RHOP08100 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.15□□□□□ -1.75
RHOP08100 MIR3146-201ENST00000580367 79 ntBASIC4.15□□□□□ -1.75
RHOP08100 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RHOP08100 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.15□□□□□ -1.75
RHOP08100 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.15□□□□□ -1.75
RHOP08100 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.15□□□□□ -1.75
RHOP08100 AC068790.3-201ENST00000602988 553 ntBASIC4.15□□□□□ -1.75
RHOP08100 OR6R2P-201ENST00000609216 300 ntBASIC4.15□□□□□ -1.75
RHOP08100 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.15□□□□□ -1.75
RHOP08100 uc_338.12-201ENST00000616344 181 ntBASIC4.15□□□□□ -1.75
RHOP08100 CR381572.1-201ENST00000625098 102 ntBASIC4.15□□□□□ -1.75
RHOP08100 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
RHOP08100 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.75
RHOP08100 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.15□□□□□ -1.75
RHOP08100 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RHOP08100 ZNF285B-201ENST00000561698 1767 ntBASIC4.14□□□□□ -1.75
RHOP08100 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
RHOP08100 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RHOP08100 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RHOP08100 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RHOP08100 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RHOP08100 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RHOP08100 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RHOP08100 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RHOP08100 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.14□□□□□ -1.75
RHOP08100 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RHOP08100 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.14□□□□□ -1.75
RHOP08100 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.14□□□□□ -1.75
RHOP08100 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RHOP08100 RNU6-451P-201ENST00000362921 107 ntBASIC4.14□□□□□ -1.75
RHOP08100 RNA5SP387-201ENST00000364226 106 ntBASIC4.14□□□□□ -1.75
RHOP08100 RNU6-456P-201ENST00000384493 107 ntBASIC4.14□□□□□ -1.75
RHOP08100 U8.11-201ENST00000384699 133 ntBASIC4.14□□□□□ -1.75
RHOP08100 U8.12-201ENST00000384701 133 ntBASIC4.14□□□□□ -1.75
RHOP08100 U3.29-201ENST00000391296 212 ntBASIC4.14□□□□□ -1.75
RHOP08100 SNORA3.3-201ENST00000408712 125 ntBASIC4.14□□□□□ -1.75
RHOP08100 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.14□□□□□ -1.75
RHOP08100 CRYBB2P1-203ENST00000415709 538 ntBASIC4.14□□□□□ -1.75
RHOP08100 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.14□□□□□ -1.75
RHOP08100 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.14□□□□□ -1.75
RHOP08100 GPR143P-201ENST00000434155 205 ntBASIC4.14□□□□□ -1.75
RHOP08100 SEPT14P3-201ENST00000439401 183 ntBASIC4.14□□□□□ -1.75
RHOP08100 AL732372.2-207ENST00000445840 183 ntBASIC4.14□□□□□ -1.75
RHOP08100 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.14□□□□□ -1.75
RHOP08100 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.14□□□□□ -1.75
RHOP08100 SEPT14P2-201ENST00000453405 183 ntBASIC4.14□□□□□ -1.75
RHOP08100 AC005008.1-201ENST00000456151 612 ntBASIC4.14□□□□□ -1.75
RHOP08100 U8.18-201ENST00000459285 133 ntBASIC4.14□□□□□ -1.75
RHOP08100 RNU6-261P-201ENST00000459506 102 ntBASIC4.14□□□□□ -1.75
RHOP08100 DEFB109F-201ENST00000491870 277 ntBASIC4.14□□□□□ -1.75
RHOP08100 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.14□□□□□ -1.75
RHOP08100 SEPT14P4-201ENST00000513445 186 ntBASIC4.14□□□□□ -1.75
RHOP08100 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.14□□□□□ -1.75
RHOP08100 RNU6-835P-201ENST00000516974 104 ntBASIC4.14□□□□□ -1.75
RHOP08100 AC008694.2-201ENST00000517591 306 ntBASIC4.14□□□□□ -1.75
RHOP08100 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.14□□□□□ -1.75
RHOP08100 FO082796.1-201ENST00000523795 183 ntBASIC4.14□□□□□ -1.75
RHOP08100 AC100770.1-201ENST00000532310 322 ntBASIC4.14□□□□□ -1.75
RHOP08100 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.14□□□□□ -1.75
RHOP08100 AC087499.8-201ENST00000578406 226 ntBASIC4.14□□□□□ -1.75
RHOP08100 AC025588.3-201ENST00000604182 274 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms