Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AP001330.4-201ENST00000604350 154 ntBASIC3.69□□□□□ -1.82
RB1P06400 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RB1P06400 AL355810.1-201ENST00000614629 552 ntBASIC3.69□□□□□ -1.82
RB1P06400 AL356266.1-201ENST00000623311 483 ntBASIC3.69□□□□□ -1.82
RB1P06400 AF246928.1-201ENST00000623768 87 ntBASIC3.69□□□□□ -1.82
RB1P06400 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.69□□□□□ -1.82
RB1P06400 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.69□□□□□ -1.82
RB1P06400 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.69□□□□□ -1.82
RB1P06400 MTCO1P9-201ENST00000505577 1534 ntBASIC3.69□□□□□ -1.82
RB1P06400 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.69□□□□□ -1.82
RB1P06400 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RB1P06400 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
RB1P06400 RPS4XP5-202ENST00000449995 1334 ntBASIC3.69□□□□□ -1.82
RB1P06400 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RB1P06400 TNPO1P3-201ENST00000436471 2662 ntBASIC3.68□□□□□ -1.82
RB1P06400 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
RB1P06400 AC006378.2-201ENST00000623178 2476 ntBASIC3.68□□□□□ -1.82
RB1P06400 NCAPGP1-201ENST00000505112 1814 ntBASIC3.68□□□□□ -1.82
RB1P06400 RNU6-173P-201ENST00000364215 104 ntBASIC3.68□□□□□ -1.82
RB1P06400 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RB1P06400 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.68□□□□□ -1.82
RB1P06400 MIR591-201ENST00000385290 95 ntBASIC3.68□□□□□ -1.82
RB1P06400 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.68□□□□□ -1.82
RB1P06400 COTL1P1-201ENST00000422309 375 ntBASIC3.68□□□□□ -1.82
RB1P06400 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.68□□□□□ -1.82
RB1P06400 Z75741.1-201ENST00000446793 314 ntBASIC3.68□□□□□ -1.82
RB1P06400 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.68□□□□□ -1.82
RB1P06400 MTND1P9-201ENST00000453775 944 ntBASIC3.68□□□□□ -1.82
RB1P06400 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.68□□□□□ -1.82
RB1P06400 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.68□□□□□ -1.82
RB1P06400 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.68□□□□□ -1.82
RB1P06400 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.68□□□□□ -1.82
RB1P06400 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.68□□□□□ -1.82
RB1P06400 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.68□□□□□ -1.82
RB1P06400 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.68□□□□□ -1.82
RB1P06400 MTCYBP22-201ENST00000603788 447 ntBASIC3.68□□□□□ -1.82
RB1P06400 AC012443.1-201ENST00000605605 231 ntBASIC3.68□□□□□ -1.82
RB1P06400 AC106028.5-201ENST00000610332 395 ntBASIC3.68□□□□□ -1.82
RB1P06400 MIR7844-201ENST00000616161 122 ntBASIC3.68□□□□□ -1.82
RB1P06400 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.68□□□□□ -1.82
RB1P06400 U7.8-201ENST00000619968 63 ntBASIC3.68□□□□□ -1.82
RB1P06400 AC091905.1-201ENST00000624400 311 ntBASIC3.68□□□□□ -1.82
RB1P06400 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.68□□□□□ -1.82
RB1P06400 AC127502.3-201ENST00000636170 1206 ntBASIC3.68□□□□□ -1.82
RB1P06400 AC006927.3-201ENST00000638789 384 ntBASIC3.68□□□□□ -1.82
RB1P06400 TAB3P1-202ENST00000452645 1634 ntBASIC3.68□□□□□ -1.82
RB1P06400 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RB1P06400 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
RB1P06400 CR383658.2-201ENST00000547576 1525 ntBASIC3.68□□□□□ -1.82
RB1P06400 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.68□□□□□ -1.82
RB1P06400 AL021368.2-201ENST00000606125 5352 ntBASIC3.68□□□□□ -1.82
RB1P06400 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RB1P06400 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RB1P06400 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RB1P06400 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RB1P06400 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
RB1P06400 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.67□□□□□ -1.82
RB1P06400 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RB1P06400 RNU6-1078P-201ENST00000364522 103 ntBASIC3.67□□□□□ -1.82
RB1P06400 U3.20-201ENST00000390909 217 ntBASIC3.67□□□□□ -1.82
RB1P06400 AL136372.1-201ENST00000403060 228 ntBASIC3.67□□□□□ -1.82
RB1P06400 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.67□□□□□ -1.82
RB1P06400 NEK4P1-201ENST00000433383 879 ntBASIC3.67□□□□□ -1.82
RB1P06400 AL445567.1-201ENST00000439121 144 ntBASIC3.67□□□□□ -1.82
RB1P06400 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.67□□□□□ -1.82
RB1P06400 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.67□□□□□ -1.82
RB1P06400 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.67□□□□□ -1.82
RB1P06400 HMGN2P16-201ENST00000456802 261 ntBASIC3.67□□□□□ -1.82
RB1P06400 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.67□□□□□ -1.82
RB1P06400 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.67□□□□□ -1.82
RB1P06400 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.67□□□□□ -1.82
RB1P06400 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.67□□□□□ -1.82
RB1P06400 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.67□□□□□ -1.82
RB1P06400 AC022483.1-201ENST00000514020 567 ntBASIC3.67□□□□□ -1.82
RB1P06400 MTCO2P32-201ENST00000514865 403 ntBASIC3.67□□□□□ -1.82
RB1P06400 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.67□□□□□ -1.82
RB1P06400 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.67□□□□□ -1.82
RB1P06400 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RB1P06400 OSBPL9P5-201ENST00000542581 171 ntBASIC3.67□□□□□ -1.82
RB1P06400 SYF2P1-201ENST00000550658 413 ntBASIC3.67□□□□□ -1.82
RB1P06400 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.67□□□□□ -1.82
RB1P06400 AC011260.1-201ENST00000578420 472 ntBASIC3.67□□□□□ -1.82
RB1P06400 AL451007.1-201ENST00000595491 289 ntBASIC3.67□□□□□ -1.82
RB1P06400 AL158211.4-201ENST00000606988 584 ntBASIC3.67□□□□□ -1.82
RB1P06400 MIR6130-201ENST00000619419 109 ntBASIC3.67□□□□□ -1.82
RB1P06400 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RB1P06400 AC079597.1-201ENST00000624306 508 ntBASIC3.67□□□□□ -1.82
RB1P06400 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.67□□□□□ -1.82
RB1P06400 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RB1P06400 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.67□□□□□ -1.82
RB1P06400 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.67□□□□□ -1.82
RB1P06400 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.67□□□□□ -1.82
RB1P06400 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.67□□□□□ -1.82
RB1P06400 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.66□□□□□ -1.82
RB1P06400 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RB1P06400 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RB1P06400 RNU6-50P-201ENST00000362356 103 ntBASIC3.66□□□□□ -1.82
RB1P06400 Y_RNA.560-201ENST00000384689 102 ntBASIC3.66□□□□□ -1.82
RB1P06400 RNU6-114P-201ENST00000384704 105 ntBASIC3.66□□□□□ -1.82
RB1P06400 RNY3P9-201ENST00000384727 106 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms