Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AP000907.2-201ENST00000530827 353 ntBASIC4.81□□□□□ -1.64
CHGBP05060 OR5B19P-201ENST00000531766 928 ntBASIC4.81□□□□□ -1.64
CHGBP05060 AC024224.1-201ENST00000538284 609 ntBASIC4.81□□□□□ -1.64
CHGBP05060 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.81□□□□□ -1.64
CHGBP05060 AC023050.3-201ENST00000541142 333 ntBASIC4.81□□□□□ -1.64
CHGBP05060 AC011611.1-201ENST00000552179 197 ntBASIC4.81□□□□□ -1.64
CHGBP05060 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.81□□□□□ -1.64
CHGBP05060 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.81□□□□□ -1.64
CHGBP05060 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.81□□□□□ -1.64
CHGBP05060 AC055876.1-202ENST00000567053 138 ntBASIC4.81□□□□□ -1.64
CHGBP05060 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.81□□□□□ -1.64
CHGBP05060 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.81□□□□□ -1.64
CHGBP05060 Y_RNA.812-201ENST00000610788 101 ntBASIC4.81□□□□□ -1.64
CHGBP05060 Y_RNA.784-201ENST00000613803 101 ntBASIC4.81□□□□□ -1.64
CHGBP05060 AC093913.1-201ENST00000614178 329 ntBASIC4.81□□□□□ -1.64
CHGBP05060 Y_RNA.787-201ENST00000616522 101 ntBASIC4.81□□□□□ -1.64
CHGBP05060 AL158196.1-201ENST00000616786 434 ntBASIC4.81□□□□□ -1.64
CHGBP05060 Y_RNA.780-201ENST00000617336 101 ntBASIC4.81□□□□□ -1.64
CHGBP05060 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CHGBP05060 Y_RNA.801-201ENST00000619005 101 ntBASIC4.81□□□□□ -1.64
CHGBP05060 AC233309.1-201ENST00000619522 751 ntBASIC4.81□□□□□ -1.64
CHGBP05060 AC138649.5-201ENST00000637456 137 ntBASIC4.81□□□□□ -1.64
CHGBP05060 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CHGBP05060 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHGBP05060 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.81□□□□□ -1.64
CHGBP05060 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHGBP05060 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHGBP05060 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHGBP05060 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.8□□□□□ -1.64
CHGBP05060 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.8□□□□□ -1.64
CHGBP05060 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHGBP05060 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHGBP05060 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHGBP05060 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHGBP05060 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHGBP05060 FRG1BP-201ENST00000278882 761 ntBASIC4.8□□□□□ -1.64
CHGBP05060 AL161781.1-201ENST00000354277 403 ntBASIC4.8□□□□□ -1.64
CHGBP05060 FRG1CP-201ENST00000358464 769 ntBASIC4.8□□□□□ -1.64
CHGBP05060 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
CHGBP05060 RNU6-373P-201ENST00000411247 98 ntBASIC4.8□□□□□ -1.64
CHGBP05060 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.8□□□□□ -1.64
CHGBP05060 HMGB1P15-201ENST00000453854 435 ntBASIC4.8□□□□□ -1.64
CHGBP05060 AC233279.1-201ENST00000455300 423 ntBASIC4.8□□□□□ -1.64
CHGBP05060 TRBV26-201ENST00000456572 344 ntBASIC4.8□□□□□ -1.64
CHGBP05060 RNU6-261P-201ENST00000459506 102 ntBASIC4.8□□□□□ -1.64
CHGBP05060 AC007537.2-201ENST00000472093 511 ntBASIC4.8□□□□□ -1.64
CHGBP05060 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHGBP05060 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.8□□□□□ -1.64
CHGBP05060 IGKV2-38-201ENST00000517443 247 ntBASIC4.8□□□□□ -1.64
CHGBP05060 MYL12AP1-201ENST00000518490 515 ntBASIC4.8□□□□□ -1.64
CHGBP05060 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.8□□□□□ -1.64
CHGBP05060 PSMA2P1-201ENST00000526365 646 ntBASIC4.8□□□□□ -1.64
CHGBP05060 OR4R1P-201ENST00000529879 463 ntBASIC4.8□□□□□ -1.64
CHGBP05060 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.8□□□□□ -1.64
CHGBP05060 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.8□□□□□ -1.64
CHGBP05060 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.8□□□□□ -1.64
CHGBP05060 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.8□□□□□ -1.64
CHGBP05060 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.8□□□□□ -1.64
CHGBP05060 AL355472.4-201ENST00000610233 626 ntBASIC4.8□□□□□ -1.64
CHGBP05060 AL365204.3-201ENST00000612448 685 ntBASIC4.8□□□□□ -1.64
CHGBP05060 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.8□□□□□ -1.64
CHGBP05060 AC009248.2-201ENST00000619826 254 ntBASIC4.8□□□□□ -1.64
CHGBP05060 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CHGBP05060 MIR7702-201ENST00000621931 59 ntBASIC4.8□□□□□ -1.64
CHGBP05060 AC087190.4-201ENST00000574616 8334 ntBASIC4.8□□□□□ -1.64
CHGBP05060 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHGBP05060 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHGBP05060 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHGBP05060 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHGBP05060 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHGBP05060 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
CHGBP05060 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHGBP05060 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.79□□□□□ -1.64
CHGBP05060 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CHGBP05060 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHGBP05060 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.79□□□□□ -1.64
CHGBP05060 RNU1-108P-201ENST00000362556 161 ntBASIC4.79□□□□□ -1.64
CHGBP05060 RNA5SP391-201ENST00000363456 119 ntBASIC4.79□□□□□ -1.64
CHGBP05060 RNU4-1-201ENST00000363925 141 ntBASIC4.79□□□□□ -1.64
CHGBP05060 SNORA57.1-201ENST00000391227 145 ntBASIC4.79□□□□□ -1.64
CHGBP05060 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHGBP05060 RPL31P45-201ENST00000419532 356 ntBASIC4.79□□□□□ -1.64
CHGBP05060 RPL36AP53-201ENST00000432891 316 ntBASIC4.79□□□□□ -1.64
CHGBP05060 GPR143P-201ENST00000434155 205 ntBASIC4.79□□□□□ -1.64
CHGBP05060 AP1S2P1-201ENST00000457344 379 ntBASIC4.79□□□□□ -1.64
CHGBP05060 RNU7-63P-201ENST00000459054 62 ntBASIC4.79□□□□□ -1.64
CHGBP05060 FTH1P2-201ENST00000466086 412 ntBASIC4.79□□□□□ -1.64
CHGBP05060 AC006512.1-201ENST00000468816 291 ntBASIC4.79□□□□□ -1.64
CHGBP05060 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHGBP05060 PCBP2P3-201ENST00000509726 843 ntBASIC4.79□□□□□ -1.64
CHGBP05060 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHGBP05060 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.79□□□□□ -1.64
CHGBP05060 SNORA40.12-201ENST00000516329 111 ntBASIC4.79□□□□□ -1.64
CHGBP05060 SCARNA14-201ENST00000516903 136 ntBASIC4.79□□□□□ -1.64
CHGBP05060 AC087369.1-201ENST00000520775 996 ntBASIC4.79□□□□□ -1.64
CHGBP05060 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.79□□□□□ -1.64
CHGBP05060 AC107953.1-201ENST00000522216 297 ntBASIC4.79□□□□□ -1.64
CHGBP05060 TOMM20P2-201ENST00000540082 421 ntBASIC4.79□□□□□ -1.64
CHGBP05060 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.79□□□□□ -1.64
CHGBP05060 AC005668.1-201ENST00000571142 476 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms