Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
APOBP04114 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.96□□□□□ -2.26
APOBP04114 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
APOBP04114 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
APOBP04114 Y_RNA.393-201ENST00000383936 102 ntBASIC0.96□□□□□ -2.26
APOBP04114 AC073310.1-201ENST00000423226 1033 ntBASIC0.96□□□□□ -2.26
APOBP04114 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.96□□□□□ -2.26
APOBP04114 AL049779.4-201ENST00000604500 156 ntBASIC0.96□□□□□ -2.26
APOBP04114 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.96□□□□□ -2.26
APOBP04114 VTRNA1-1-201ENST00000363120 99 ntBASIC0.96□□□□□ -2.26
APOBP04114 RNA5SP61-201ENST00000516453 100 ntBASIC0.96□□□□□ -2.26
APOBP04114 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC0.96□□□□□ -2.26
APOBP04114 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC0.96□□□□□ -2.26
APOBP04114 RMST_6.1-201ENST00000611980 203 ntBASIC0.96□□□□□ -2.26
APOBP04114 DDX10P1-201ENST00000448545 1933 ntBASIC0.96□□□□□ -2.26
APOBP04114 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.96□□□□□ -2.26
APOBP04114 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC0.96□□□□□ -2.26
APOBP04114 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
APOBP04114 RNU4-51P-201ENST00000364206 140 ntBASIC0.96□□□□□ -2.26
APOBP04114 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
APOBP04114 MIR625-201ENST00000385047 85 ntBASIC0.96□□□□□ -2.26
APOBP04114 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC0.96□□□□□ -2.26
APOBP04114 NDUFS5P3-201ENST00000450668 321 ntBASIC0.96□□□□□ -2.26
APOBP04114 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC0.96□□□□□ -2.26
APOBP04114 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
APOBP04114 SETP2-201ENST00000553886 926 ntBASIC0.96□□□□□ -2.26
APOBP04114 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC0.96□□□□□ -2.26
APOBP04114 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
APOBP04114 OR4G11P-202ENST00000642116 1414 ntBASIC0.96□□□□□ -2.26
APOBP04114 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
APOBP04114 AC008568.2-201ENST00000623862 2313 ntBASIC0.95□□□□□ -2.26
APOBP04114 AC096992.1-201ENST00000459808 709 ntBASIC0.95□□□□□ -2.26
APOBP04114 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC0.95□□□□□ -2.26
APOBP04114 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
APOBP04114 AL359273.1-201ENST00000510918 627 ntBASIC0.95□□□□□ -2.26
APOBP04114 SNORD53B-201ENST00000577887 78 ntBASIC0.95□□□□□ -2.26
APOBP04114 RN7SL793P-201ENST00000583259 296 ntBASIC0.95□□□□□ -2.26
APOBP04114 AC243773.3-201ENST00000613270 256 ntBASIC0.95□□□□□ -2.26
APOBP04114 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
APOBP04114 RNA5SP295-201ENST00000362655 121 ntBASIC0.95□□□□□ -2.26
APOBP04114 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC0.95□□□□□ -2.26
APOBP04114 AC079203.1-201ENST00000487972 404 ntBASIC0.95□□□□□ -2.26
APOBP04114 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC0.95□□□□□ -2.26
APOBP04114 FAM106DP-201ENST00000586416 501 ntBASIC0.95□□□□□ -2.26
APOBP04114 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC0.95□□□□□ -2.26
APOBP04114 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC0.95□□□□□ -2.26
APOBP04114 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.95□□□□□ -2.26
APOBP04114 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
APOBP04114 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
APOBP04114 XIAPP3-201ENST00000312918 795 ntBASIC0.95□□□□□ -2.26
APOBP04114 MIR517C-201ENST00000385103 95 ntBASIC0.95□□□□□ -2.26
APOBP04114 AL035405.1-201ENST00000400795 710 ntBASIC0.95□□□□□ -2.26
APOBP04114 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC0.95□□□□□ -2.26
APOBP04114 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC0.95□□□□□ -2.26
APOBP04114 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC0.95□□□□□ -2.26
APOBP04114 RPS6P15-201ENST00000431996 751 ntBASIC0.95□□□□□ -2.26
APOBP04114 KATNBL1P3-201ENST00000443475 909 ntBASIC0.95□□□□□ -2.26
APOBP04114 CFTRP1-201ENST00000456646 183 ntBASIC0.95□□□□□ -2.26
APOBP04114 HMGN1P8-201ENST00000463578 288 ntBASIC0.95□□□□□ -2.26
APOBP04114 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.95□□□□□ -2.26
APOBP04114 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC0.95□□□□□ -2.26
APOBP04114 AC068338.1-201ENST00000565567 176 ntBASIC0.95□□□□□ -2.26
APOBP04114 AC008687.2-201ENST00000597865 520 ntBASIC0.95□□□□□ -2.26
APOBP04114 AC016727.2-201ENST00000603988 621 ntBASIC0.95□□□□□ -2.26
APOBP04114 AP005137.2-201ENST00000609238 400 ntBASIC0.95□□□□□ -2.26
APOBP04114 AC000367.1-201ENST00000452711 1766 ntBASIC0.94□□□□□ -2.26
APOBP04114 FNDC3CP-201ENST00000420795 1155 ntBASIC0.94□□□□□ -2.26
APOBP04114 CKS1BP5-201ENST00000434172 273 ntBASIC0.94□□□□□ -2.26
APOBP04114 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC0.94□□□□□ -2.26
APOBP04114 AC069528.1-202ENST00000482888 637 ntBASIC0.94□□□□□ -2.26
APOBP04114 RNA5SP476-201ENST00000516613 103 ntBASIC0.94□□□□□ -2.26
APOBP04114 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC0.94□□□□□ -2.26
APOBP04114 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.94□□□□□ -2.26
APOBP04114 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC0.94□□□□□ -2.26
APOBP04114 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC0.94□□□□□ -2.26
APOBP04114 AL353770.2-201ENST00000620024 78 ntBASIC0.94□□□□□ -2.26
APOBP04114 AL118496.1-201ENST00000440201 1812 ntBASIC0.94□□□□□ -2.26
APOBP04114 SNORA67.6-201ENST00000391093 99 ntBASIC0.94□□□□□ -2.26
APOBP04114 RPL23AP29-201ENST00000397284 453 ntBASIC0.94□□□□□ -2.26
APOBP04114 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC0.94□□□□□ -2.26
APOBP04114 HMGB1P45-201ENST00000435986 653 ntBASIC0.94□□□□□ -2.26
APOBP04114 CALM1P1-201ENST00000442082 433 ntBASIC0.94□□□□□ -2.26
APOBP04114 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
APOBP04114 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC0.94□□□□□ -2.26
APOBP04114 MIR98-201ENST00000606724 119 ntBASIC0.94□□□□□ -2.26
APOBP04114 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC0.94□□□□□ -2.26
APOBP04114 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.94□□□□□ -2.26
APOBP04114 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC0.94□□□□□ -2.26
APOBP04114 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC0.94□□□□□ -2.26
APOBP04114 AC034222.1-201ENST00000494052 532 ntBASIC0.94□□□□□ -2.26
APOBP04114 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.94□□□□□ -2.26
APOBP04114 SUMO2P6-201ENST00000505273 288 ntBASIC0.94□□□□□ -2.26
APOBP04114 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC0.94□□□□□ -2.26
APOBP04114 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.94□□□□□ -2.26
APOBP04114 GLYCAM1-201ENST00000546596 285 ntBASIC0.94□□□□□ -2.26
APOBP04114 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC0.94□□□□□ -2.26
APOBP04114 AC068446.3-201ENST00000555285 382 ntBASIC0.94□□□□□ -2.26
APOBP04114 AC109446.2-201ENST00000567872 497 ntBASIC0.94□□□□□ -2.26
APOBP04114 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC0.94□□□□□ -2.26
APOBP04114 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms