Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VTNP04004 RNU4-40P-201ENST00000364351 143 ntBASIC3.37□□□□□ -1.87
VTNP04004 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.37□□□□□ -1.87
VTNP04004 RNU6-878P-201ENST00000384578 110 ntBASIC3.37□□□□□ -1.87
VTNP04004 MIR607-201ENST00000385241 96 ntBASIC3.37□□□□□ -1.87
VTNP04004 U3.29-201ENST00000391296 212 ntBASIC3.37□□□□□ -1.87
VTNP04004 AL138880.1-201ENST00000405824 642 ntBASIC3.37□□□□□ -1.87
VTNP04004 HMGB1P11-201ENST00000413899 637 ntBASIC3.37□□□□□ -1.87
VTNP04004 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.37□□□□□ -1.87
VTNP04004 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.37□□□□□ -1.87
VTNP04004 SNRPEP7-201ENST00000438350 220 ntBASIC3.37□□□□□ -1.87
VTNP04004 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.37□□□□□ -1.87
VTNP04004 RPS27AP8-201ENST00000452665 445 ntBASIC3.37□□□□□ -1.87
VTNP04004 BX322784.1-201ENST00000455793 1077 ntBASIC3.37□□□□□ -1.87
VTNP04004 AL122001.1-201ENST00000457027 370 ntBASIC3.37□□□□□ -1.87
VTNP04004 AC010401.1-201ENST00000463867 348 ntBASIC3.37□□□□□ -1.87
VTNP04004 AC092451.1-201ENST00000480211 153 ntBASIC3.37□□□□□ -1.87
VTNP04004 RPL31P13-201ENST00000484151 370 ntBASIC3.37□□□□□ -1.87
VTNP04004 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.37□□□□□ -1.87
VTNP04004 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.37□□□□□ -1.87
VTNP04004 AC005178.1-201ENST00000508392 440 ntBASIC3.37□□□□□ -1.87
VTNP04004 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.37□□□□□ -1.87
VTNP04004 RN7SKP289-201ENST00000517244 295 ntBASIC3.37□□□□□ -1.87
VTNP04004 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.37□□□□□ -1.87
VTNP04004 AP004371.1-201ENST00000525240 214 ntBASIC3.37□□□□□ -1.87
VTNP04004 OR4P1P-201ENST00000530808 1136 ntBASIC3.37□□□□□ -1.87
VTNP04004 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.37□□□□□ -1.87
VTNP04004 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.37□□□□□ -1.87
VTNP04004 ROCK1P1-201ENST00000573767 549 ntBASIC3.37□□□□□ -1.87
VTNP04004 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.37□□□□□ -1.87
VTNP04004 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.37□□□□□ -1.87
VTNP04004 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VTNP04004 WISP1-OT1-201ENST00000602893 642 ntBASIC3.37□□□□□ -1.87
VTNP04004 AC103710.4-201ENST00000609301 899 ntBASIC3.37□□□□□ -1.87
VTNP04004 RMST_8.1-201ENST00000610287 165 ntBASIC3.37□□□□□ -1.87
VTNP04004 AC093783.1-201ENST00000612976 329 ntBASIC3.37□□□□□ -1.87
VTNP04004 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VTNP04004 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.37□□□□□ -1.87
VTNP04004 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
VTNP04004 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VTNP04004 ELL2P3-201ENST00000457883 1602 ntBASIC3.37□□□□□ -1.87
VTNP04004 AL356473.1-201ENST00000406203 1408 ntBASIC3.36□□□□□ -1.87
VTNP04004 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.36□□□□□ -1.87
VTNP04004 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.36□□□□□ -1.87
VTNP04004 NUP58P1-201ENST00000502546 1738 ntBASIC3.36□□□□□ -1.87
VTNP04004 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.36□□□□□ -1.87
VTNP04004 USP8P1-201ENST00000494673 3183 ntBASIC3.36□□□□□ -1.87
VTNP04004 RNU6-462P-201ENST00000362659 105 ntBASIC3.36□□□□□ -1.87
VTNP04004 RNU6-433P-201ENST00000363216 104 ntBASIC3.36□□□□□ -1.87
VTNP04004 RNU5F-7P-201ENST00000363696 115 ntBASIC3.36□□□□□ -1.87
VTNP04004 RNU6-777P-201ENST00000364265 104 ntBASIC3.36□□□□□ -1.87
VTNP04004 HMGB1P17-201ENST00000403495 628 ntBASIC3.36□□□□□ -1.87
VTNP04004 RPL7P25-201ENST00000404151 721 ntBASIC3.36□□□□□ -1.87
VTNP04004 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.36□□□□□ -1.87
VTNP04004 RNU2-15P-201ENST00000410692 191 ntBASIC3.36□□□□□ -1.87
VTNP04004 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.36□□□□□ -1.87
VTNP04004 TPMTP2-201ENST00000414372 726 ntBASIC3.36□□□□□ -1.87
VTNP04004 MTATP6P27-201ENST00000416987 621 ntBASIC3.36□□□□□ -1.87
VTNP04004 AC019178.2-201ENST00000423595 505 ntBASIC3.36□□□□□ -1.87
VTNP04004 AC022018.1-201ENST00000430685 241 ntBASIC3.36□□□□□ -1.87
VTNP04004 LSM1P1-201ENST00000438629 273 ntBASIC3.36□□□□□ -1.87
VTNP04004 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.36□□□□□ -1.87
VTNP04004 MTND5P14-201ENST00000441481 1267 ntBASIC3.36□□□□□ -1.87
VTNP04004 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.36□□□□□ -1.87
VTNP04004 PAXBP1P1-201ENST00000449315 447 ntBASIC3.36□□□□□ -1.87
VTNP04004 RPS20P24-201ENST00000457473 361 ntBASIC3.36□□□□□ -1.87
VTNP04004 AC092754.2-201ENST00000463506 460 ntBASIC3.36□□□□□ -1.87
VTNP04004 RPS29P26-201ENST00000477483 171 ntBASIC3.36□□□□□ -1.87
VTNP04004 AC068724.1-201ENST00000487100 792 ntBASIC3.36□□□□□ -1.87
VTNP04004 OR2A20P-203ENST00000498397 1268 ntBASIC3.36□□□□□ -1.87
VTNP04004 AC097462.2-201ENST00000504623 481 ntBASIC3.36□□□□□ -1.87
VTNP04004 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.36□□□□□ -1.87
VTNP04004 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.36□□□□□ -1.87
VTNP04004 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.36□□□□□ -1.87
VTNP04004 RN7SKP60-201ENST00000516985 239 ntBASIC3.36□□□□□ -1.87
VTNP04004 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.36□□□□□ -1.87
VTNP04004 AL356057.1-201ENST00000533798 831 ntBASIC3.36□□□□□ -1.87
VTNP04004 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VTNP04004 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.36□□□□□ -1.87
VTNP04004 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.36□□□□□ -1.87
VTNP04004 AC011260.1-201ENST00000578420 472 ntBASIC3.36□□□□□ -1.87
VTNP04004 BNIP3P23-201ENST00000599655 511 ntBASIC3.36□□□□□ -1.87
VTNP04004 RPL23AP92-201ENST00000603609 255 ntBASIC3.36□□□□□ -1.87
VTNP04004 AC080013.4-201ENST00000607624 649 ntBASIC3.36□□□□□ -1.87
VTNP04004 AC107214.2-201ENST00000608204 634 ntBASIC3.36□□□□□ -1.87
VTNP04004 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.36□□□□□ -1.87
VTNP04004 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.36□□□□□ -1.87
VTNP04004 AC006329.2-201ENST00000611491 394 ntBASIC3.36□□□□□ -1.87
VTNP04004 AC004009.2-201ENST00000623016 728 ntBASIC3.36□□□□□ -1.87
VTNP04004 AC009039.2-201ENST00000624524 529 ntBASIC3.36□□□□□ -1.87
VTNP04004 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.36□□□□□ -1.87
VTNP04004 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.36□□□□□ -1.87
VTNP04004 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VTNP04004 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VTNP04004 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.36□□□□□ -1.87
VTNP04004 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
VTNP04004 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VTNP04004 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
VTNP04004 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VTNP04004 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms