Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.34□□□□□ -1.87
CLPTM1O96005 RPL21P8-201ENST00000465083 535 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 RN7SL132P-201ENST00000478131 296 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.34□□□□□ -1.87
CLPTM1O96005 RN7SL323P-201ENST00000494712 295 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.34□□□□□ -1.87
CLPTM1O96005 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.34□□□□□ -1.87
CLPTM1O96005 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.34□□□□□ -1.87
CLPTM1O96005 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.34□□□□□ -1.87
CLPTM1O96005 FABP5P5-201ENST00000515537 406 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 AC093853.1-201ENST00000515689 483 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.34□□□□□ -1.87
CLPTM1O96005 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.34□□□□□ -1.87
CLPTM1O96005 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.34□□□□□ -1.87
CLPTM1O96005 HSPE1P5-201ENST00000561489 272 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.34□□□□□ -1.87
CLPTM1O96005 AC053481.3-201ENST00000577881 843 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 MTND1P15-201ENST00000579262 949 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.34□□□□□ -1.87
CLPTM1O96005 AC087683.1-201ENST00000591187 441 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 SEPT7P9-203ENST00000604116 343 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 AL109618.2-201ENST00000605527 211 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 AC104073.3-201ENST00000610942 955 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 AC005332.10-201ENST00000612725 619 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 AL354798.1-201ENST00000622505 329 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.34□□□□□ -1.87
CLPTM1O96005 CRYM-AS1-204ENST00000637983 556 ntBASIC3.34□□□□□ -1.87
CLPTM1O96005 MTND4P5-201ENST00000435821 1374 ntBASIC3.34□□□□□ -1.88
CLPTM1O96005 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLPTM1O96005 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLPTM1O96005 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLPTM1O96005 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CLPTM1O96005 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.34□□□□□ -1.88
CLPTM1O96005 AC097714.1-201ENST00000511272 1647 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLPTM1O96005 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CLPTM1O96005 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CLPTM1O96005 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLPTM1O96005 RNU6-28P-201ENST00000362378 107 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 RNU6-263P-201ENST00000363811 107 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 U3.11-201ENST00000364476 212 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 RNU6-533P-201ENST00000384144 107 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 Y_RNA.505-201ENST00000384489 102 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 MT-TC-201ENST00000387405 66 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 U3.29-201ENST00000391296 212 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 MTND4LP20-201ENST00000402379 270 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 MIR1305-201ENST00000408300 86 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 RNU2-15P-201ENST00000410692 191 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 RNU2-16P-201ENST00000410712 136 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 MTCO1P21-201ENST00000416634 589 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.33□□□□□ -1.88
CLPTM1O96005 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.33□□□□□ -1.88
CLPTM1O96005 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.33□□□□□ -1.88
CLPTM1O96005 RPL7P36-201ENST00000444633 681 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLPTM1O96005 AL592447.1-201ENST00000447592 540 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.33□□□□□ -1.88
CLPTM1O96005 MTCO1P42-201ENST00000457379 726 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 RPL7P5-201ENST00000471472 736 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 RN7SL283P-201ENST00000489055 303 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.33□□□□□ -1.88
CLPTM1O96005 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.33□□□□□ -1.88
CLPTM1O96005 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
CLPTM1O96005 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.33□□□□□ -1.88
CLPTM1O96005 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.33□□□□□ -1.88
CLPTM1O96005 AC245166.1-201ENST00000521012 253 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 AC022695.1-201ENST00000522089 237 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 AP003033.1-201ENST00000527244 415 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 AP002453.2-201ENST00000533503 320 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.33□□□□□ -1.88
CLPTM1O96005 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.33□□□□□ -1.88
CLPTM1O96005 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.33□□□□□ -1.88
CLPTM1O96005 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.33□□□□□ -1.88
CLPTM1O96005 MIR5685-201ENST00000579080 79 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 AC068790.6-201ENST00000602558 258 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 AC025165.5-201ENST00000602802 578 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 AC015871.2-201ENST00000603605 948 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 SNORA62.6-201ENST00000606322 83 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 AC091965.4-201ENST00000607691 587 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 AC104010.1-201ENST00000616889 150 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 AL590240.3-201ENST00000621416 943 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 AL161637.1-201ENST00000622380 412 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLPTM1O96005 TEX21P-201ENST00000447107 1476 ntBASIC3.33□□□□□ -1.88
CLPTM1O96005 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLPTM1O96005 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLPTM1O96005 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CLPTM1O96005 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLPTM1O96005 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.32□□□□□ -1.88
CLPTM1O96005 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLPTM1O96005 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CLPTM1O96005 RNU6-989P-201ENST00000362756 107 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 RNU6-853P-201ENST00000364306 107 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLPTM1O96005 RNU6-348P-201ENST00000384386 107 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CLPTM1O96005 HMGN1P14-201ENST00000412459 517 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AC005517.2-201ENST00000424673 553 ntBASIC3.32□□□□□ -1.88
CLPTM1O96005 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms