Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.97□□□□□ -1.77
DDX58O95786 AC011233.1-201ENST00000422812 283 ntBASIC3.97□□□□□ -1.77
DDX58O95786 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.97□□□□□ -1.77
DDX58O95786 AC234781.2-201ENST00000426370 994 ntBASIC3.97□□□□□ -1.77
DDX58O95786 TXNL1P1-201ENST00000429528 554 ntBASIC3.97□□□□□ -1.77
DDX58O95786 AL117351.1-201ENST00000438864 766 ntBASIC3.97□□□□□ -1.77
DDX58O95786 AC098826.2-201ENST00000452011 651 ntBASIC3.97□□□□□ -1.77
DDX58O95786 ATG12P2-201ENST00000456830 416 ntBASIC3.97□□□□□ -1.77
DDX58O95786 ARPC3P2-201ENST00000457786 533 ntBASIC3.97□□□□□ -1.77
DDX58O95786 S100A11P2-201ENST00000467589 312 ntBASIC3.97□□□□□ -1.77
DDX58O95786 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.97□□□□□ -1.77
DDX58O95786 CBX3P3-201ENST00000508108 532 ntBASIC3.97□□□□□ -1.77
DDX58O95786 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.97□□□□□ -1.77
DDX58O95786 AC008885.1-201ENST00000514930 301 ntBASIC3.97□□□□□ -1.77
DDX58O95786 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.97□□□□□ -1.77
DDX58O95786 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.97□□□□□ -1.77
DDX58O95786 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
DDX58O95786 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
DDX58O95786 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.97□□□□□ -1.77
DDX58O95786 MED28P6-201ENST00000558776 231 ntBASIC3.97□□□□□ -1.77
DDX58O95786 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.97□□□□□ -1.77
DDX58O95786 AC106900.2-201ENST00000604994 317 ntBASIC3.97□□□□□ -1.77
DDX58O95786 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.97□□□□□ -1.77
DDX58O95786 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
DDX58O95786 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
DDX58O95786 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
DDX58O95786 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
DDX58O95786 RNU1-75P-201ENST00000347264 129 ntBASIC3.96□□□□□ -1.78
DDX58O95786 Y_RNA.18-201ENST00000362461 102 ntBASIC3.96□□□□□ -1.78
DDX58O95786 RNU6-744P-201ENST00000365557 107 ntBASIC3.96□□□□□ -1.78
DDX58O95786 RNU6-1316P-201ENST00000384242 108 ntBASIC3.96□□□□□ -1.78
DDX58O95786 RNA5SP31-201ENST00000411144 127 ntBASIC3.96□□□□□ -1.78
DDX58O95786 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.96□□□□□ -1.78
DDX58O95786 YPEL5P1-201ENST00000419731 367 ntBASIC3.96□□□□□ -1.78
DDX58O95786 BX679664.1-201ENST00000434429 253 ntBASIC3.96□□□□□ -1.78
DDX58O95786 AC024082.2-201ENST00000434771 238 ntBASIC3.96□□□□□ -1.78
DDX58O95786 ISCA1P2-201ENST00000438679 421 ntBASIC3.96□□□□□ -1.78
DDX58O95786 AC016696.1-201ENST00000446949 318 ntBASIC3.96□□□□□ -1.78
DDX58O95786 AL592447.1-201ENST00000447592 540 ntBASIC3.96□□□□□ -1.78
DDX58O95786 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.96□□□□□ -1.78
DDX58O95786 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.96□□□□□ -1.78
DDX58O95786 RPL30P9-201ENST00000465586 330 ntBASIC3.96□□□□□ -1.78
DDX58O95786 AC068587.2-201ENST00000478386 781 ntBASIC3.96□□□□□ -1.78
DDX58O95786 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.96□□□□□ -1.78
DDX58O95786 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.96□□□□□ -1.78
DDX58O95786 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.96□□□□□ -1.78
DDX58O95786 HSPE1P23-201ENST00000509838 286 ntBASIC3.96□□□□□ -1.78
DDX58O95786 AC034159.1-201ENST00000513885 583 ntBASIC3.96□□□□□ -1.78
DDX58O95786 AC026801.2-201ENST00000515352 425 ntBASIC3.96□□□□□ -1.78
DDX58O95786 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.96□□□□□ -1.78
DDX58O95786 RNU6-528P-201ENST00000516926 100 ntBASIC3.96□□□□□ -1.78
DDX58O95786 NDUFB9P3-201ENST00000521269 501 ntBASIC3.96□□□□□ -1.78
DDX58O95786 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.96□□□□□ -1.78
DDX58O95786 ISCA1P3-201ENST00000577104 373 ntBASIC3.96□□□□□ -1.78
DDX58O95786 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.96□□□□□ -1.78
DDX58O95786 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.96□□□□□ -1.78
DDX58O95786 VN1R92P-201ENST00000598511 928 ntBASIC3.96□□□□□ -1.78
DDX58O95786 AC021171.1-201ENST00000603137 706 ntBASIC3.96□□□□□ -1.78
DDX58O95786 AC106791.2-201ENST00000604680 391 ntBASIC3.96□□□□□ -1.78
DDX58O95786 AL158211.4-201ENST00000606988 584 ntBASIC3.96□□□□□ -1.78
DDX58O95786 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.96□□□□□ -1.78
DDX58O95786 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.96□□□□□ -1.78
DDX58O95786 AC002550.2-201ENST00000621246 394 ntBASIC3.96□□□□□ -1.78
DDX58O95786 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
DDX58O95786 AC087359.1-201ENST00000508335 1740 ntBASIC3.95□□□□□ -1.78
DDX58O95786 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
DDX58O95786 AL353746.1-201ENST00000566293 6881 ntBASIC3.95□□□□□ -1.78
DDX58O95786 RPL21P132-201ENST00000331267 462 ntBASIC3.95□□□□□ -1.78
DDX58O95786 RNU1-140P-201ENST00000365040 165 ntBASIC3.95□□□□□ -1.78
DDX58O95786 RNU6-723P-201ENST00000383973 107 ntBASIC3.95□□□□□ -1.78
DDX58O95786 AL136372.1-201ENST00000403060 228 ntBASIC3.95□□□□□ -1.78
DDX58O95786 RPL7P25-201ENST00000404151 721 ntBASIC3.95□□□□□ -1.78
DDX58O95786 AL591034.1-201ENST00000407447 340 ntBASIC3.95□□□□□ -1.78
DDX58O95786 Z98941.1-201ENST00000407764 100 ntBASIC3.95□□□□□ -1.78
DDX58O95786 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.95□□□□□ -1.78
DDX58O95786 BX119904.4-201ENST00000424402 301 ntBASIC3.95□□□□□ -1.78
DDX58O95786 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX58O95786 UBE2V1P13-201ENST00000436983 439 ntBASIC3.95□□□□□ -1.78
DDX58O95786 MTND5P2-201ENST00000442927 1142 ntBASIC3.95□□□□□ -1.78
DDX58O95786 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX58O95786 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX58O95786 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX58O95786 RNU7-170P-201ENST00000459303 61 ntBASIC3.95□□□□□ -1.78
DDX58O95786 AC072039.1-201ENST00000477611 581 ntBASIC3.95□□□□□ -1.78
DDX58O95786 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.95□□□□□ -1.78
DDX58O95786 RPL7P23-201ENST00000493874 747 ntBASIC3.95□□□□□ -1.78
DDX58O95786 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX58O95786 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX58O95786 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.95□□□□□ -1.78
DDX58O95786 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX58O95786 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX58O95786 DUXAP5-201ENST00000529668 529 ntBASIC3.95□□□□□ -1.78
DDX58O95786 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX58O95786 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX58O95786 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX58O95786 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX58O95786 BDH2P1-201ENST00000602288 736 ntBASIC3.95□□□□□ -1.78
DDX58O95786 AC072039.2-201ENST00000608883 439 ntBASIC3.95□□□□□ -1.78
DDX58O95786 AC135507.2-201ENST00000612443 309 ntBASIC3.95□□□□□ -1.78
DDX58O95786 AL592295.2-201ENST00000612578 206 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms