Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.89□□□□□ -1.47
PTCD1O75127 GABPAP-201ENST00000419271 1356 ntBASIC5.89□□□□□ -1.47
PTCD1O75127 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
PTCD1O75127 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCD1O75127 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PTCD1O75127 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTCD1O75127 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCD1O75127 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTCD1O75127 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTCD1O75127 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCD1O75127 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PTCD1O75127 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTCD1O75127 RNU6-379P-201ENST00000363813 104 ntBASIC5.88□□□□□ -1.47
PTCD1O75127 RPL23AP38-201ENST00000423801 469 ntBASIC5.88□□□□□ -1.47
PTCD1O75127 RPL7P46-201ENST00000425129 740 ntBASIC5.88□□□□□ -1.47
PTCD1O75127 AL137792.2-201ENST00000443484 235 ntBASIC5.88□□□□□ -1.47
PTCD1O75127 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.88□□□□□ -1.47
PTCD1O75127 RN7SL98P-201ENST00000462271 300 ntBASIC5.88□□□□□ -1.47
PTCD1O75127 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.88□□□□□ -1.47
PTCD1O75127 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCD1O75127 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.88□□□□□ -1.47
PTCD1O75127 AC093303.1-201ENST00000514549 295 ntBASIC5.88□□□□□ -1.47
PTCD1O75127 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.88□□□□□ -1.47
PTCD1O75127 AP005902.1-201ENST00000521358 186 ntBASIC5.88□□□□□ -1.47
PTCD1O75127 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.88□□□□□ -1.47
PTCD1O75127 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.88□□□□□ -1.47
PTCD1O75127 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.88□□□□□ -1.47
PTCD1O75127 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.88□□□□□ -1.47
PTCD1O75127 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCD1O75127 AP001486.3-201ENST00000615334 372 ntBASIC5.88□□□□□ -1.47
PTCD1O75127 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCD1O75127 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTCD1O75127 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTCD1O75127 AC073136.1-201ENST00000449426 2884 ntBASIC5.88□□□□□ -1.47
PTCD1O75127 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.88□□□□□ -1.47
PTCD1O75127 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PTCD1O75127 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PTCD1O75127 AC020633.1-201ENST00000468439 2247 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.87□□□□□ -1.47
PTCD1O75127 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.87□□□□□ -1.47
PTCD1O75127 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTCD1O75127 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTCD1O75127 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.87□□□□□ -1.47
PTCD1O75127 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTCD1O75127 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PTCD1O75127 Y_RNA.167-201ENST00000363735 109 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 RNU6-637P-201ENST00000384050 107 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PTCD1O75127 AL109755.1-201ENST00000401791 649 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 RNU6-847P-201ENST00000411115 108 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 UBE2FP1-201ENST00000416536 447 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 AL669831.1-202ENST00000428504 417 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 AC004938.1-201ENST00000438468 308 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 PHBP16-201ENST00000446318 950 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 AC010655.1-201ENST00000449336 292 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.87□□□□□ -1.47
PTCD1O75127 AC091167.1-201ENST00000492017 396 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 AC108078.2-201ENST00000510750 236 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.87□□□□□ -1.47
PTCD1O75127 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTCD1O75127 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTCD1O75127 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.87□□□□□ -1.47
PTCD1O75127 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.87□□□□□ -1.47
PTCD1O75127 AC106785.1-201ENST00000565935 262 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.87□□□□□ -1.47
PTCD1O75127 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.87□□□□□ -1.47
PTCD1O75127 AL157817.1-201ENST00000614264 790 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 FAM157A-202ENST00000615155 405 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 AL023881.1-201ENST00000621088 301 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 AL596275.2-204ENST00000641628 552 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 AL596275.2-206ENST00000641957 626 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
PTCD1O75127 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTCD1O75127 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTCD1O75127 PHKBP1-201ENST00000450951 1951 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTCD1O75127 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTCD1O75127 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.87□□□□□ -1.47
PTCD1O75127 MAPK10-328ENST00000641553 4009 ntBASIC5.87□□□□□ -1.47
PTCD1O75127 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.87□□□□□ -1.47
PTCD1O75127 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCD1O75127 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
PTCD1O75127 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PTCD1O75127 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.86□□□□□ -1.47
PTCD1O75127 AL359893.1-201ENST00000447628 1580 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCD1O75127 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.86□□□□□ -1.47
PTCD1O75127 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PTCD1O75127 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PTCD1O75127 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PTCD1O75127 AP000580.1-201ENST00000404439 358 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 AL121834.1-202ENST00000404494 277 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 RN7SKP158-201ENST00000410453 326 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 RNU4-46P-201ENST00000410818 138 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 RPL23AP26-201ENST00000412728 464 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 RPL30P2-201ENST00000414021 291 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.86□□□□□ -1.47
PTCD1O75127 AL139396.1-201ENST00000421137 167 ntBASIC5.86□□□□□ -1.47
PTCD1O75127 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.86□□□□□ -1.47
PTCD1O75127 OR4C10P-201ENST00000434991 931 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms