Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC060780.3-201ENST00000589464 80 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 AL137849.1-201ENST00000604767 169 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 AP001521.1-201ENST00000609150 300 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.82□□□□□ -1.8
SMAD6O43541 AC110994.2-201ENST00000635481 492 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.82□□□□□ -1.8
SMAD6O43541 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.82□□□□□ -1.8
SMAD6O43541 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SMAD6O43541 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SMAD6O43541 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SMAD6O43541 AC117529.2-201ENST00000512159 2068 ntBASIC3.82□□□□□ -1.8
SMAD6O43541 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SMAD6O43541 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SMAD6O43541 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SMAD6O43541 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SMAD6O43541 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.81□□□□□ -1.8
SMAD6O43541 OR4G11P-202ENST00000642116 1414 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SMAD6O43541 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.81□□□□□ -1.8
SMAD6O43541 Y_RNA.160-201ENST00000363677 92 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 Y_RNA.409-201ENST00000383990 98 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 MIR506-201ENST00000384998 124 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 RNU2-65P-201ENST00000410162 185 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SMAD6O43541 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.81□□□□□ -1.8
SMAD6O43541 EI24P1-201ENST00000416584 867 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 RPL21P111-201ENST00000418453 477 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.81□□□□□ -1.8
SMAD6O43541 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SMAD6O43541 AL513174.1-201ENST00000423182 629 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.81□□□□□ -1.8
SMAD6O43541 RABEPKP1-201ENST00000440529 1026 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.81□□□□□ -1.8
SMAD6O43541 FDX1P2-201ENST00000450769 375 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.81□□□□□ -1.8
SMAD6O43541 AC097493.1-201ENST00000463958 372 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 AC092757.1-201ENST00000467293 467 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 AC007537.2-201ENST00000472093 511 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 AC079382.1-201ENST00000493346 557 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.81□□□□□ -1.8
SMAD6O43541 MTCO2P30-201ENST00000503662 364 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 HMGB1P29-201ENST00000505659 499 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 MTND3P22-201ENST00000510932 243 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 AC024589.1-201ENST00000512207 263 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 AC026412.2-201ENST00000512270 1075 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.81□□□□□ -1.8
SMAD6O43541 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.81□□□□□ -1.8
SMAD6O43541 RNU1-95P-201ENST00000516357 160 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 RNU1-128P-201ENST00000516704 160 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 COX6B1P6-201ENST00000522347 255 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.81□□□□□ -1.8
SMAD6O43541 MTND1P35-201ENST00000526739 508 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.81□□□□□ -1.8
SMAD6O43541 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.81□□□□□ -1.8
SMAD6O43541 AC123904.3-201ENST00000547218 814 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.81□□□□□ -1.8
SMAD6O43541 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.81□□□□□ -1.8
SMAD6O43541 AC044792.1-201ENST00000593294 196 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.81□□□□□ -1.8
SMAD6O43541 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SMAD6O43541 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SMAD6O43541 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SMAD6O43541 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.81□□□□□ -1.8
SMAD6O43541 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
SMAD6O43541 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
SMAD6O43541 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
SMAD6O43541 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD6O43541 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SMAD6O43541 FAM35DP-201ENST00000323387 2712 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 LINC00561-201ENST00000565815 2738 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SMAD6O43541 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.8□□□□□ -1.8
SMAD6O43541 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.8□□□□□ -1.8
SMAD6O43541 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD6O43541 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD6O43541 RNU6-777P-201ENST00000364265 104 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 RNY4P34-201ENST00000364779 95 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 RNU6-657P-201ENST00000383904 107 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 RNU6-116P-201ENST00000384042 109 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 RNU1-89P-201ENST00000384592 164 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 RNU6-1151P-201ENST00000384684 107 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 MIR607-201ENST00000385241 96 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
SMAD6O43541 RPL21P17-201ENST00000397467 475 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SMAD6O43541 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.8□□□□□ -1.8
SMAD6O43541 Y_RNA.608-201ENST00000410647 95 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 RNU6-195P-201ENST00000411352 109 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AC073264.1-201ENST00000411508 416 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.8□□□□□ -1.8
SMAD6O43541 USP9YP27-201ENST00000418455 438 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 USP9YP36-201ENST00000424581 829 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AC109583.1-201ENST00000432156 268 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 RPL21P112-201ENST00000434403 463 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 AC009961.2-201ENST00000435771 251 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SMAD6O43541 LSM1P1-201ENST00000438629 273 ntBASIC3.8□□□□□ -1.8
SMAD6O43541 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.8□□□□□ -1.8
SMAD6O43541 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms