Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 RPS20P14-201ENST00000412545 360 ntBASIC9.21□□□□□ -0.94
MSH5O43196 AC068138.1-201ENST00000412635 217 ntBASIC9.21□□□□□ -0.94
MSH5O43196 GAPDHP53-201ENST00000458397 924 ntBASIC9.21□□□□□ -0.94
MSH5O43196 AC092824.1-201ENST00000483524 576 ntBASIC9.21□□□□□ -0.94
MSH5O43196 RN7SL775P-201ENST00000498361 336 ntBASIC9.21□□□□□ -0.94
MSH5O43196 RNU6-107P-201ENST00000516643 102 ntBASIC9.21□□□□□ -0.94
MSH5O43196 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC9.21□□□□□ -0.94
MSH5O43196 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC9.21□□□□□ -0.94
MSH5O43196 AL355816.1-201ENST00000607951 118 ntBASIC9.21□□□□□ -0.94
MSH5O43196 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC9.21□□□□□ -0.94
MSH5O43196 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC9.21□□□□□ -0.94
MSH5O43196 AL162726.3-218ENST00000636401 95 ntBASIC9.21□□□□□ -0.94
MSH5O43196 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
MSH5O43196 AC006116.1-201ENST00000587908 2171 ntBASIC9.21□□□□□ -0.94
MSH5O43196 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
MSH5O43196 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
MSH5O43196 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
MSH5O43196 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
MSH5O43196 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
MSH5O43196 GUCY1B2-204ENST00000531898 1979 ntBASIC9.21□□□□□ -0.94
MSH5O43196 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
MSH5O43196 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
MSH5O43196 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC9.21□□□□□ -0.94
MSH5O43196 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
MSH5O43196 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
MSH5O43196 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC9.2□□□□□ -0.94
MSH5O43196 ODF3-202ENST00000342593 386 ntTSL 5 BASIC9.2□□□□□ -0.94
MSH5O43196 RNU4-82P-201ENST00000362443 140 ntBASIC9.2□□□□□ -0.94
MSH5O43196 RNU6-633P-201ENST00000362612 103 ntBASIC9.2□□□□□ -0.94
MSH5O43196 Y_RNA.91-201ENST00000363042 107 ntBASIC9.2□□□□□ -0.94
MSH5O43196 RNU6-438P-201ENST00000365561 103 ntBASIC9.2□□□□□ -0.94
MSH5O43196 MIR759-201ENST00000390224 91 ntBASIC9.2□□□□□ -0.94
MSH5O43196 RNA5SP115-201ENST00000411160 107 ntBASIC9.2□□□□□ -0.94
MSH5O43196 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC9.2□□□□□ -0.94
MSH5O43196 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC9.2□□□□□ -0.94
MSH5O43196 TRBV5-2-201ENST00000489095 273 ntBASIC9.2□□□□□ -0.94
MSH5O43196 RN7SL629P-201ENST00000489622 285 ntBASIC9.2□□□□□ -0.94
MSH5O43196 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC9.2□□□□□ -0.94
MSH5O43196 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC9.2□□□□□ -0.94
MSH5O43196 AC020895.1-201ENST00000595362 272 ntBASIC9.2□□□□□ -0.94
MSH5O43196 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC9.2□□□□□ -0.94
MSH5O43196 MRPL57P3-201ENST00000619218 176 ntBASIC9.2□□□□□ -0.94
MSH5O43196 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC9.2□□□□□ -0.94
MSH5O43196 AC092724.1-201ENST00000624623 3397 ntBASIC9.2□□□□□ -0.94
MSH5O43196 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
MSH5O43196 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MSH5O43196 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
MSH5O43196 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
MSH5O43196 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
MSH5O43196 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
MSH5O43196 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
MSH5O43196 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC9.19□□□□□ -0.94
MSH5O43196 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
MSH5O43196 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
MSH5O43196 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
MSH5O43196 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC9.19□□□□□ -0.94
MSH5O43196 RN7SKP188-201ENST00000410789 317 ntBASIC9.19□□□□□ -0.94
MSH5O43196 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC9.19□□□□□ -0.94
MSH5O43196 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC9.19□□□□□ -0.94
MSH5O43196 COX6B1P5-201ENST00000509843 249 ntBASIC9.19□□□□□ -0.94
MSH5O43196 RNU6-927P-201ENST00000516199 100 ntBASIC9.19□□□□□ -0.94
MSH5O43196 IGLV1-62-201ENST00000518003 441 ntBASIC9.19□□□□□ -0.94
MSH5O43196 AC034229.6-201ENST00000623704 224 ntBASIC9.19□□□□□ -0.94
MSH5O43196 MIR1910-201ENST00000636955 80 ntBASIC9.19□□□□□ -0.94
MSH5O43196 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
MSH5O43196 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
MSH5O43196 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
MSH5O43196 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC9.19□□□□□ -0.94
MSH5O43196 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
MSH5O43196 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC9.19□□□□□ -0.94
MSH5O43196 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
MSH5O43196 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
MSH5O43196 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
MSH5O43196 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
MSH5O43196 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
MSH5O43196 MFSD8-219ENST00000641228 2559 ntBASIC9.18□□□□□ -0.94
MSH5O43196 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC9.18□□□□□ -0.94
MSH5O43196 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
MSH5O43196 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
MSH5O43196 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
MSH5O43196 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
MSH5O43196 RNA5SP391-201ENST00000363456 119 ntBASIC9.18□□□□□ -0.94
MSH5O43196 Y_RNA.191-201ENST00000363972 113 ntBASIC9.18□□□□□ -0.94
MSH5O43196 RN7SKP15-201ENST00000364742 309 ntBASIC9.18□□□□□ -0.94
MSH5O43196 RNY1P4-201ENST00000384595 115 ntBASIC9.18□□□□□ -0.94
MSH5O43196 AC013442.1-201ENST00000397347 228 ntBASIC9.18□□□□□ -0.94
MSH5O43196 AC000089.1-201ENST00000424559 801 ntBASIC9.18□□□□□ -0.94
MSH5O43196 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
MSH5O43196 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC9.18□□□□□ -0.94
MSH5O43196 AC022905.1-201ENST00000503430 3048 ntBASIC9.18□□□□□ -0.94
MSH5O43196 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC9.18□□□□□ -0.94
MSH5O43196 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
MSH5O43196 AC007448.1-201ENST00000582714 234 ntBASIC9.18□□□□□ -0.94
MSH5O43196 RN7SL667P-201ENST00000582817 298 ntBASIC9.18□□□□□ -0.94
MSH5O43196 LINC02035-201ENST00000610128 5476 ntBASIC9.18□□□□□ -0.94
MSH5O43196 FAS-AS1.2-201ENST00000620386 170 ntBASIC9.18□□□□□ -0.94
MSH5O43196 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
MSH5O43196 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
MSH5O43196 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC9.18□□□□□ -0.94
MSH5O43196 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms