Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RNU6ATAC-201ENST00000408749 126 ntBASIC3.39□□□□□ -1.87
TO15178 RN7SKP285-201ENST00000410137 318 ntBASIC3.39□□□□□ -1.87
TO15178 HMGN1P24-201ENST00000412282 298 ntBASIC3.39□□□□□ -1.87
TO15178 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.39□□□□□ -1.87
TO15178 SSXP9-201ENST00000417503 292 ntBASIC3.39□□□□□ -1.87
TO15178 HMGB3P20-201ENST00000417997 600 ntBASIC3.39□□□□□ -1.87
TO15178 RPL17P36-201ENST00000420302 549 ntBASIC3.39□□□□□ -1.87
TO15178 AC233728.2-201ENST00000425348 757 ntBASIC3.39□□□□□ -1.87
TO15178 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.39□□□□□ -1.87
TO15178 AL445584.1-201ENST00000431451 330 ntBASIC3.39□□□□□ -1.87
TO15178 SNRPEP4-201ENST00000435815 279 ntBASIC3.39□□□□□ -1.87
TO15178 RPL35AP22-201ENST00000436855 335 ntBASIC3.39□□□□□ -1.87
TO15178 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TO15178 USP9YP12-201ENST00000450481 570 ntBASIC3.39□□□□□ -1.87
TO15178 AL590365.1-201ENST00000450788 243 ntBASIC3.39□□□□□ -1.87
TO15178 AC007967.1-201ENST00000455422 1159 ntBASIC3.39□□□□□ -1.87
TO15178 AC068724.1-201ENST00000487100 792 ntBASIC3.39□□□□□ -1.87
TO15178 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.39□□□□□ -1.87
TO15178 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
TO15178 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
TO15178 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.39□□□□□ -1.87
TO15178 AC091965.2-201ENST00000512324 613 ntBASIC3.39□□□□□ -1.87
TO15178 AC026801.2-201ENST00000515352 425 ntBASIC3.39□□□□□ -1.87
TO15178 FABP5P5-201ENST00000515537 406 ntBASIC3.39□□□□□ -1.87
TO15178 Y_RNA.695-201ENST00000516715 107 ntBASIC3.39□□□□□ -1.87
TO15178 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TO15178 SNRPGP16-201ENST00000533275 226 ntBASIC3.39□□□□□ -1.87
TO15178 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.39□□□□□ -1.87
TO15178 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.39□□□□□ -1.87
TO15178 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.39□□□□□ -1.87
TO15178 COX6CP3-201ENST00000580869 223 ntBASIC3.39□□□□□ -1.87
TO15178 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.39□□□□□ -1.87
TO15178 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.39□□□□□ -1.87
TO15178 AC068790.3-201ENST00000602988 553 ntBASIC3.39□□□□□ -1.87
TO15178 AL359999.1-201ENST00000604513 294 ntBASIC3.39□□□□□ -1.87
TO15178 AC008962.1-201ENST00000605729 304 ntBASIC3.39□□□□□ -1.87
TO15178 AL355810.1-201ENST00000614629 552 ntBASIC3.39□□□□□ -1.87
TO15178 AL732618.1-201ENST00000623251 301 ntBASIC3.39□□□□□ -1.87
TO15178 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
TO15178 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.39□□□□□ -1.87
TO15178 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TO15178 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.39□□□□□ -1.87
TO15178 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.38□□□□□ -1.87
TO15178 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.38□□□□□ -1.87
TO15178 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
TO15178 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.38□□□□□ -1.87
TO15178 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TO15178 Y_RNA.46-201ENST00000362695 102 ntBASIC3.38□□□□□ -1.87
TO15178 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TO15178 SNORD115.1-201ENST00000391109 76 ntBASIC3.38□□□□□ -1.87
TO15178 RPS20P2-201ENST00000402520 389 ntBASIC3.38□□□□□ -1.87
TO15178 RNU6-516P-201ENST00000411381 104 ntBASIC3.38□□□□□ -1.87
TO15178 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.38□□□□□ -1.87
TO15178 AC245054.1-201ENST00000420944 258 ntBASIC3.38□□□□□ -1.87
TO15178 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.38□□□□□ -1.87
TO15178 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.38□□□□□ -1.87
TO15178 NDUFB1P1-201ENST00000435191 180 ntBASIC3.38□□□□□ -1.87
TO15178 MTND4P32-201ENST00000437189 1237 ntBASIC3.38□□□□□ -1.87
TO15178 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TO15178 RPL23AP31-201ENST00000456160 467 ntBASIC3.38□□□□□ -1.87
TO15178 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.38□□□□□ -1.87
TO15178 VN1R104P-201ENST00000505115 1009 ntBASIC3.38□□□□□ -1.87
TO15178 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TO15178 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.38□□□□□ -1.87
TO15178 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.38□□□□□ -1.87
TO15178 RNU6-201P-201ENST00000517100 61 ntBASIC3.38□□□□□ -1.87
TO15178 AC008489.1-201ENST00000524271 483 ntBASIC3.38□□□□□ -1.87
TO15178 AP000907.2-201ENST00000530827 353 ntBASIC3.38□□□□□ -1.87
TO15178 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.38□□□□□ -1.87
TO15178 AC008011.1-201ENST00000545989 227 ntBASIC3.38□□□□□ -1.87
TO15178 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.38□□□□□ -1.87
TO15178 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.38□□□□□ -1.87
TO15178 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.38□□□□□ -1.87
TO15178 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.38□□□□□ -1.87
TO15178 OR4T1P-201ENST00000554933 911 ntBASIC3.38□□□□□ -1.87
TO15178 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.38□□□□□ -1.87
TO15178 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.38□□□□□ -1.87
TO15178 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.38□□□□□ -1.87
TO15178 KLKP1-201ENST00000595979 403 ntBASIC3.38□□□□□ -1.87
TO15178 AP001330.4-201ENST00000604350 154 ntBASIC3.38□□□□□ -1.87
TO15178 AL109618.2-201ENST00000605527 211 ntBASIC3.38□□□□□ -1.87
TO15178 AC012443.1-201ENST00000605605 231 ntBASIC3.38□□□□□ -1.87
TO15178 RNVU1-4-201ENST00000612985 164 ntBASIC3.38□□□□□ -1.87
TO15178 AL121772.2-201ENST00000614331 297 ntBASIC3.38□□□□□ -1.87
TO15178 AL450472.3-201ENST00000615578 367 ntBASIC3.38□□□□□ -1.87
TO15178 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.38□□□□□ -1.87
TO15178 AC006111.3-201ENST00000622137 383 ntBASIC3.38□□□□□ -1.87
TO15178 AC243312.2-201ENST00000623340 601 ntBASIC3.38□□□□□ -1.87
TO15178 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.38□□□□□ -1.87
TO15178 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TO15178 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TO15178 ZNF826P-207ENST00000622273 1910 ntBASIC3.38□□□□□ -1.87
TO15178 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TO15178 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TO15178 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TO15178 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TO15178 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.37□□□□□ -1.87
TO15178 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TO15178 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
TO15178 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms