Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC007529.1-201ENST00000418574 2178 ntBASIC5.25□□□□□ -1.57
SOX1O00570 AL137003.2-201ENST00000606924 2538 ntBASIC5.25□□□□□ -1.57
SOX1O00570 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SOX1O00570 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SOX1O00570 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
SOX1O00570 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.24□□□□□ -1.57
SOX1O00570 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.24□□□□□ -1.57
SOX1O00570 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
SOX1O00570 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX1O00570 GVINP1-202ENST00000531871 7271 ntBASIC5.24□□□□□ -1.57
SOX1O00570 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
SOX1O00570 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX1O00570 Y_RNA.307-201ENST00000365022 117 ntBASIC5.24□□□□□ -1.57
SOX1O00570 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SOX1O00570 Y_RNA.473-201ENST00000384333 102 ntBASIC5.24□□□□□ -1.57
SOX1O00570 RNU6-1026P-201ENST00000384465 108 ntBASIC5.24□□□□□ -1.57
SOX1O00570 RNU2-3P-201ENST00000410144 191 ntBASIC5.24□□□□□ -1.57
SOX1O00570 RNU6-628P-201ENST00000410675 107 ntBASIC5.24□□□□□ -1.57
SOX1O00570 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX1O00570 RPL21P24-201ENST00000413752 448 ntBASIC5.24□□□□□ -1.57
SOX1O00570 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.24□□□□□ -1.57
SOX1O00570 YME1L1P1-201ENST00000429435 297 ntBASIC5.24□□□□□ -1.57
SOX1O00570 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.24□□□□□ -1.57
SOX1O00570 AL161722.2-201ENST00000434731 981 ntBASIC5.24□□□□□ -1.57
SOX1O00570 AL353597.2-202ENST00000434901 373 ntBASIC5.24□□□□□ -1.57
SOX1O00570 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.24□□□□□ -1.57
SOX1O00570 AL162591.2-201ENST00000449634 317 ntBASIC5.24□□□□□ -1.57
SOX1O00570 SNORD5.1-201ENST00000458800 75 ntBASIC5.24□□□□□ -1.57
SOX1O00570 RN7SL188P-201ENST00000469842 285 ntBASIC5.24□□□□□ -1.57
SOX1O00570 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX1O00570 RNU6-475P-201ENST00000516073 104 ntBASIC5.24□□□□□ -1.57
SOX1O00570 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.24□□□□□ -1.57
SOX1O00570 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
SOX1O00570 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.24□□□□□ -1.57
SOX1O00570 IPO5P1-202ENST00000600039 287 ntBASIC5.24□□□□□ -1.57
SOX1O00570 AC092447.9-201ENST00000603395 144 ntBASIC5.24□□□□□ -1.57
SOX1O00570 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.24□□□□□ -1.57
SOX1O00570 SNHG22-203ENST00000617833 660 ntBASIC5.24□□□□□ -1.57
SOX1O00570 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.24□□□□□ -1.57
SOX1O00570 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX1O00570 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SOX1O00570 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SOX1O00570 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.24□□□□□ -1.57
SOX1O00570 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SOX1O00570 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.24□□□□□ -1.57
SOX1O00570 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SOX1O00570 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SOX1O00570 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.24□□□□□ -1.57
SOX1O00570 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.24□□□□□ -1.57
SOX1O00570 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
SOX1O00570 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SOX1O00570 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SOX1O00570 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SOX1O00570 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SOX1O00570 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SOX1O00570 SCARNA15-201ENST00000607520 4325 ntBASIC5.23□□□□□ -1.57
SOX1O00570 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.23□□□□□ -1.57
SOX1O00570 AL360270.2-201ENST00000562952 5985 ntBASIC5.23□□□□□ -1.57
SOX1O00570 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SOX1O00570 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.23□□□□□ -1.57
SOX1O00570 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SOX1O00570 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SOX1O00570 Y_RNA.152-201ENST00000363578 100 ntBASIC5.23□□□□□ -1.57
SOX1O00570 RNA5SP283-201ENST00000365604 119 ntBASIC5.23□□□□□ -1.57
SOX1O00570 RPL11P3-201ENST00000395256 523 ntBASIC5.23□□□□□ -1.57
SOX1O00570 AL022722.2-201ENST00000402519 180 ntBASIC5.23□□□□□ -1.57
SOX1O00570 Z99755.1-201ENST00000414048 380 ntBASIC5.23□□□□□ -1.57
SOX1O00570 AL590632.1-201ENST00000424289 371 ntBASIC5.23□□□□□ -1.57
SOX1O00570 USMG5P1-201ENST00000425964 177 ntBASIC5.23□□□□□ -1.57
SOX1O00570 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.23□□□□□ -1.57
SOX1O00570 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.23□□□□□ -1.57
SOX1O00570 CEACAMP4-201ENST00000457676 421 ntBASIC5.23□□□□□ -1.57
SOX1O00570 SCARNA10-201ENST00000459255 330 ntBASIC5.23□□□□□ -1.57
SOX1O00570 RN7SL189P-201ENST00000468631 289 ntBASIC5.23□□□□□ -1.57
SOX1O00570 AC026801.1-201ENST00000497178 464 ntBASIC5.23□□□□□ -1.57
SOX1O00570 AC022493.2-201ENST00000506122 481 ntBASIC5.23□□□□□ -1.57
SOX1O00570 RNU6-307P-201ENST00000516743 106 ntBASIC5.23□□□□□ -1.57
SOX1O00570 AP000827.1-201ENST00000527814 258 ntBASIC5.23□□□□□ -1.57
SOX1O00570 RN7SL176P-201ENST00000580352 264 ntBASIC5.23□□□□□ -1.57
SOX1O00570 AC008739.3-201ENST00000603262 127 ntBASIC5.23□□□□□ -1.57
SOX1O00570 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.23□□□□□ -1.57
SOX1O00570 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.23□□□□□ -1.57
SOX1O00570 AC116447.1-201ENST00000613153 453 ntBASIC5.23□□□□□ -1.57
SOX1O00570 CR381572.2-201ENST00000624852 397 ntBASIC5.23□□□□□ -1.57
SOX1O00570 MIR492-201ENST00000638676 116 ntBASIC5.23□□□□□ -1.57
SOX1O00570 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.23□□□□□ -1.57
SOX1O00570 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SOX1O00570 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SOX1O00570 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SOX1O00570 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SOX1O00570 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.23□□□□□ -1.57
SOX1O00570 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SOX1O00570 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
SOX1O00570 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
SOX1O00570 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.22□□□□□ -1.57
SOX1O00570 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX1O00570 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX1O00570 AL022311.1-201ENST00000623726 19416 ntBASIC5.22□□□□□ -1.57
SOX1O00570 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SOX1O00570 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms