Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.84□□□□□ -2.11
SDCBPO00560 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.84□□□□□ -2.11
SDCBPO00560 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.84□□□□□ -2.11
SDCBPO00560 MTND2P19-201ENST00000449129 1012 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 RNU6-717P-201ENST00000459076 104 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.84□□□□□ -2.11
SDCBPO00560 RNU1-103P-201ENST00000516502 125 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 AC103833.1-201ENST00000517442 172 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.84□□□□□ -2.11
SDCBPO00560 OR8K4P-201ENST00000534608 872 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.84□□□□□ -2.11
SDCBPO00560 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.84□□□□□ -2.11
SDCBPO00560 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.84□□□□□ -2.11
SDCBPO00560 VN1R88P-201ENST00000596787 292 ntBASIC1.84□□□□□ -2.11
SDCBPO00560 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.84□□□□□ -2.11
SDCBPO00560 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.84□□□□□ -2.11
SDCBPO00560 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.84□□□□□ -2.11
SDCBPO00560 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.84□□□□□ -2.11
SDCBPO00560 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SDCBPO00560 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SDCBPO00560 MTND5P11-201ENST00000511037 1812 ntBASIC1.84□□□□□ -2.12
SDCBPO00560 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
SDCBPO00560 MTND4P1-201ENST00000457501 1466 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.83□□□□□ -2.12
SDCBPO00560 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SDCBPO00560 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SDCBPO00560 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.83□□□□□ -2.12
SDCBPO00560 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SDCBPO00560 MIR221-201ENST00000385135 110 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SDCBPO00560 AC096533.1-201ENST00000411645 353 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 MORF4L1P6-201ENST00000418771 268 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 AC092427.1-202ENST00000430569 476 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SDCBPO00560 AC009296.1-201ENST00000443146 155 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 AL929288.2-201ENST00000446368 407 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 RPL23AP7-203ENST00000449021 469 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 AC011753.1-201ENST00000451001 220 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.83□□□□□ -2.12
SDCBPO00560 RBM43P1-201ENST00000476891 1081 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 VPS26AP1-201ENST00000483197 979 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SDCBPO00560 AC011352.3-201ENST00000505162 593 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.83□□□□□ -2.12
SDCBPO00560 AC104108.1-201ENST00000509930 412 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 SUB1P1-201ENST00000524415 382 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SDCBPO00560 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.83□□□□□ -2.12
SDCBPO00560 AC067805.1-201ENST00000559344 470 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 AC074051.3-201ENST00000570238 358 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 AP001033.2-201ENST00000609701 1003 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 MIR1264-201ENST00000616374 69 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 AC009831.4-201ENST00000620744 325 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 SCARNA15.3-201ENST00000626315 122 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 SCARNA4.1-201ENST00000628597 123 ntBASIC1.83□□□□□ -2.12
SDCBPO00560 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.83□□□□□ -2.12
SDCBPO00560 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SDCBPO00560 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.83□□□□□ -2.12
SDCBPO00560 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.82□□□□□ -2.12
SDCBPO00560 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
SDCBPO00560 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SDCBPO00560 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
SDCBPO00560 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SDCBPO00560 RNA5SP289-201ENST00000362332 137 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 RNA5SP160-201ENST00000364866 120 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 SNORD82-201ENST00000365530 70 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 CYCSP45-201ENST00000402289 315 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 RNA5SP338-201ENST00000410495 85 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 AC007064.1-201ENST00000412238 351 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.82□□□□□ -2.12
SDCBPO00560 AC009414.1-201ENST00000427200 443 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 AL590762.3-201ENST00000436372 640 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 AC114878.1-201ENST00000441166 358 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 AL591719.1-201ENST00000444669 744 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 MTND5P8-201ENST00000449817 1083 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 AL021397.1-201ENST00000451806 248 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.82□□□□□ -2.12
SDCBPO00560 AC108729.2-201ENST00000476543 840 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 AC090096.1-201ENST00000489168 390 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 RPL23AP49-201ENST00000492925 468 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.82□□□□□ -2.12
SDCBPO00560 RNU6-27P-201ENST00000516146 107 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 SNORA70.16-201ENST00000516390 95 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 RNU1-40P-201ENST00000516816 164 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 RNU1-97P-201ENST00000516872 164 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.82□□□□□ -2.12
SDCBPO00560 AC087276.1-201ENST00000529659 480 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 OR4P1P-201ENST00000530808 1136 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.82□□□□□ -2.12
SDCBPO00560 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
SDCBPO00560 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.82□□□□□ -2.12
SDCBPO00560 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.82□□□□□ -2.12
SDCBPO00560 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.82□□□□□ -2.12
SDCBPO00560 MIR5694-201ENST00000581190 76 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 MIR5002-201ENST00000584713 97 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.82□□□□□ -2.12
SDCBPO00560 AC245517.5-201ENST00000611529 162 ntBASIC1.82□□□□□ -2.12
SDCBPO00560 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
SDCBPO00560 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms