Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC005336.3-201ENST00000623833 2679 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 MTCO1P4-201ENST00000520516 1409 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 METTL21EP-201ENST00000298105 713 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 RNU6-650P-201ENST00000365658 111 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 AC129850.1-201ENST00000436203 508 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 BTBD7P2-201ENST00000441962 620 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 HMGB1P26-201ENST00000452520 628 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 RNU6-1218P-201ENST00000458990 108 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 CIR1P1-201ENST00000524055 1133 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 MTCO2P22-201ENST00000603246 681 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 BX322635.1-201ENST00000605804 496 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.64□□□□□ -2.15
COL6A6A6NMZ7 RNF6P1-201ENST00000444889 1784 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 OR5T3-201ENST00000303059 1023 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 RNA5SP344-201ENST00000411081 104 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 NDUFA5P10-201ENST00000432147 357 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 PIGFP3-201ENST00000441918 722 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 XKRY2-201ENST00000442362 1093 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 RPL34P26-201ENST00000445636 354 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AC025459.1-201ENST00000504072 156 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 MTCO1P30-201ENST00000515244 580 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 PTP4A1P6-201ENST00000531034 478 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AL049870.4-201ENST00000555741 486 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AC005951.1-201ENST00000576706 485 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 MIR5089-201ENST00000580047 84 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 MAGOH2P-202ENST00000584384 429 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 MIR5002-201ENST00000584713 97 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 HMGB1P51-201ENST00000605166 638 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AC005156.1-201ENST00000613371 573 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AC095038.3-201ENST00000634439 195 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 RNU2-37P-201ENST00000410695 177 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 MTND4LP14-201ENST00000429447 288 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 SDR42E1P3-201ENST00000438345 502 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 HMGB3P30-201ENST00000457863 606 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 FABP5P6-201ENST00000510588 409 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AC004486.1-201ENST00000546846 233 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AL161670.1-201ENST00000554348 137 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 LINC00557-201ENST00000563184 1279 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AC006270.2-201ENST00000578523 652 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AL078603.1-201ENST00000603824 313 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AC079791.1-201ENST00000605356 973 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 MIR502-201ENST00000606349 86 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 AC073348.1-201ENST00000623002 331 ntBASIC1.63□□□□□ -2.15
COL6A6A6NMZ7 ZNF33CP-201ENST00000432492 2030 ntBASIC1.62□□□□□ -2.15
COL6A6A6NMZ7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
COL6A6A6NMZ7 CCNB2P1-201ENST00000399411 1150 ntBASIC1.62□□□□□ -2.15
COL6A6A6NMZ7 AC092745.2-202ENST00000411880 369 ntBASIC1.62□□□□□ -2.15
COL6A6A6NMZ7 MTND4P24-201ENST00000424002 397 ntBASIC1.62□□□□□ -2.15
COL6A6A6NMZ7 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.62□□□□□ -2.15
COL6A6A6NMZ7 TPMTP4-201ENST00000450749 678 ntBASIC1.62□□□□□ -2.15
COL6A6A6NMZ7 HMGB3P15-201ENST00000507326 574 ntBASIC1.62□□□□□ -2.15
COL6A6A6NMZ7 AC012414.2-201ENST00000559474 187 ntBASIC1.62□□□□□ -2.15
COL6A6A6NMZ7 AC024595.1-201ENST00000623088 387 ntBASIC1.62□□□□□ -2.15
COL6A6A6NMZ7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.62□□□□□ -2.15
COL6A6A6NMZ7 MTND5P3-201ENST00000438536 1800 ntBASIC1.62□□□□□ -2.15
COL6A6A6NMZ7 MTND5P7-201ENST00000413558 1798 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 RNU6-317P-201ENST00000384031 107 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 HIGD1AP11-201ENST00000438361 280 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 PTGES3P5-201ENST00000455109 434 ntBASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.61□□□□□ -2.15
COL6A6A6NMZ7 AC092451.1-201ENST00000480211 153 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms