Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 USP9YP10-201ENST00000454868 628 ntBASIC2.17□□□□□ -2.06
RGPD3A6NKT7 LDHBP3-201ENST00000514909 822 ntBASIC2.17□□□□□ -2.06
RGPD3A6NKT7 AL121917.1-203ENST00000605534 577 ntBASIC2.17□□□□□ -2.06
RGPD3A6NKT7 AC022709.1-201ENST00000615967 87 ntBASIC2.17□□□□□ -2.06
RGPD3A6NKT7 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
RGPD3A6NKT7 HIGD1AP11-201ENST00000438361 280 ntBASIC2.16□□□□□ -2.06
RGPD3A6NKT7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.16□□□□□ -2.06
RGPD3A6NKT7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.16□□□□□ -2.06
RGPD3A6NKT7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.16□□□□□ -2.06
RGPD3A6NKT7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.16□□□□□ -2.06
RGPD3A6NKT7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.16□□□□□ -2.06
RGPD3A6NKT7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.16□□□□□ -2.06
RGPD3A6NKT7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.16□□□□□ -2.06
RGPD3A6NKT7 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.16□□□□□ -2.06
RGPD3A6NKT7 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.16□□□□□ -2.06
RGPD3A6NKT7 AC007620.3-201ENST00000608131 497 ntBASIC2.16□□□□□ -2.06
RGPD3A6NKT7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.16□□□□□ -2.06
RGPD3A6NKT7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.16□□□□□ -2.06
RGPD3A6NKT7 MTND4P23-201ENST00000447723 1363 ntBASIC2.16□□□□□ -2.06
RGPD3A6NKT7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RGPD3A6NKT7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
RGPD3A6NKT7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RGPD3A6NKT7 RN7SKP101-201ENST00000411376 320 ntBASIC2.15□□□□□ -2.06
RGPD3A6NKT7 RPS3AP9-201ENST00000417027 792 ntBASIC2.15□□□□□ -2.06
RGPD3A6NKT7 OR51B8P-201ENST00000449892 769 ntBASIC2.15□□□□□ -2.06
RGPD3A6NKT7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.15□□□□□ -2.06
RGPD3A6NKT7 AC008015.1-201ENST00000555505 465 ntBASIC2.15□□□□□ -2.06
RGPD3A6NKT7 RPS3AP23-202ENST00000574601 686 ntBASIC2.15□□□□□ -2.06
RGPD3A6NKT7 KATNBL1P1-201ENST00000605192 748 ntBASIC2.15□□□□□ -2.06
RGPD3A6NKT7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
RGPD3A6NKT7 MTND4P1-201ENST00000457501 1466 ntBASIC2.15□□□□□ -2.06
RGPD3A6NKT7 MIR3199-1-201ENST00000582434 88 ntBASIC2.15□□□□□ -2.07
RGPD3A6NKT7 OR4G1P-201ENST00000588632 938 ntBASIC2.15□□□□□ -2.07
RGPD3A6NKT7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.15□□□□□ -2.07
RGPD3A6NKT7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RGPD3A6NKT7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.14□□□□□ -2.07
RGPD3A6NKT7 MIR153-1-201ENST00000384914 90 ntBASIC2.14□□□□□ -2.07
RGPD3A6NKT7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.14□□□□□ -2.07
RGPD3A6NKT7 RFESDP1-201ENST00000422350 461 ntBASIC2.14□□□□□ -2.07
RGPD3A6NKT7 WARS2P1-201ENST00000429678 537 ntBASIC2.14□□□□□ -2.07
RGPD3A6NKT7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.14□□□□□ -2.07
RGPD3A6NKT7 XKRYP6-201ENST00000440468 1116 ntBASIC2.14□□□□□ -2.07
RGPD3A6NKT7 XKRYP3-201ENST00000442113 1116 ntBASIC2.14□□□□□ -2.07
RGPD3A6NKT7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RGPD3A6NKT7 AC017099.1-201ENST00000448261 1028 ntBASIC2.14□□□□□ -2.07
RGPD3A6NKT7 AC146507.1-201ENST00000468335 354 ntBASIC2.14□□□□□ -2.07
RGPD3A6NKT7 AC005912.1-201ENST00000495392 255 ntBASIC2.14□□□□□ -2.07
RGPD3A6NKT7 AC090453.1-201ENST00000495560 436 ntBASIC2.14□□□□□ -2.07
RGPD3A6NKT7 HMGB1P47-201ENST00000511281 589 ntBASIC2.14□□□□□ -2.07
RGPD3A6NKT7 MTCO2P32-201ENST00000514865 403 ntBASIC2.14□□□□□ -2.07
RGPD3A6NKT7 MIR4446-201ENST00000578505 67 ntBASIC2.14□□□□□ -2.07
RGPD3A6NKT7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.14□□□□□ -2.07
RGPD3A6NKT7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.14□□□□□ -2.07
RGPD3A6NKT7 PVT1_3.1-201ENST00000620853 95 ntBASIC2.14□□□□□ -2.07
RGPD3A6NKT7 AC006249.1-201ENST00000621223 471 ntBASIC2.14□□□□□ -2.07
RGPD3A6NKT7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RGPD3A6NKT7 ZNF876P-202ENST00000398732 1485 ntBASIC2.14□□□□□ -2.07
RGPD3A6NKT7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
RGPD3A6NKT7 AL589994.1-201ENST00000404962 340 ntBASIC2.13□□□□□ -2.07
RGPD3A6NKT7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
RGPD3A6NKT7 HSPE1P1-201ENST00000421494 318 ntBASIC2.13□□□□□ -2.07
RGPD3A6NKT7 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.13□□□□□ -2.07
RGPD3A6NKT7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.13□□□□□ -2.07
RGPD3A6NKT7 RPL17P49-201ENST00000443728 411 ntBASIC2.13□□□□□ -2.07
RGPD3A6NKT7 AC010627.1-201ENST00000503819 1294 ntBASIC2.13□□□□□ -2.07
RGPD3A6NKT7 FABP5P6-201ENST00000510588 409 ntBASIC2.13□□□□□ -2.07
RGPD3A6NKT7 DNAJC8P1-201ENST00000554535 372 ntBASIC2.13□□□□□ -2.07
RGPD3A6NKT7 HPVC1-201ENST00000629899 1198 ntBASIC2.13□□□□□ -2.07
RGPD3A6NKT7 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RGPD3A6NKT7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RGPD3A6NKT7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.13□□□□□ -2.07
RGPD3A6NKT7 AL121972.1-201ENST00000402023 252 ntBASIC2.13□□□□□ -2.07
RGPD3A6NKT7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.13□□□□□ -2.07
RGPD3A6NKT7 AL645568.3-201ENST00000433683 316 ntBASIC2.13□□□□□ -2.07
RGPD3A6NKT7 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.13□□□□□ -2.07
RGPD3A6NKT7 USP9YP15-201ENST00000442391 422 ntBASIC2.13□□□□□ -2.07
RGPD3A6NKT7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.13□□□□□ -2.07
RGPD3A6NKT7 AC023424.2-201ENST00000493479 777 ntBASIC2.13□□□□□ -2.07
RGPD3A6NKT7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.13□□□□□ -2.07
RGPD3A6NKT7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.13□□□□□ -2.07
RGPD3A6NKT7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.13□□□□□ -2.07
RGPD3A6NKT7 AF279873.1-201ENST00000523393 313 ntBASIC2.13□□□□□ -2.07
RGPD3A6NKT7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.13□□□□□ -2.07
RGPD3A6NKT7 AP001180.3-201ENST00000582221 145 ntBASIC2.13□□□□□ -2.07
RGPD3A6NKT7 AC006023.2-201ENST00000609916 167 ntBASIC2.13□□□□□ -2.07
RGPD3A6NKT7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
RGPD3A6NKT7 MAPK10-266ENST00000641066 6555 ntBASIC2.12□□□□□ -2.07
RGPD3A6NKT7 ZNF33CP-201ENST00000432492 2030 ntBASIC2.12□□□□□ -2.07
RGPD3A6NKT7 AP002907.1-201ENST00000606361 1430 ntBASIC2.12□□□□□ -2.07
RGPD3A6NKT7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
RGPD3A6NKT7 OR4G1P-203ENST00000641984 1631 ntBASIC2.12□□□□□ -2.07
RGPD3A6NKT7 SSXP9-201ENST00000417503 292 ntBASIC2.12□□□□□ -2.07
RGPD3A6NKT7 SSXP4-201ENST00000451349 245 ntBASIC2.12□□□□□ -2.07
RGPD3A6NKT7 AC007375.1-201ENST00000554513 578 ntBASIC2.12□□□□□ -2.07
RGPD3A6NKT7 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.12□□□□□ -2.07
RGPD3A6NKT7 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.12□□□□□ -2.07
RGPD3A6NKT7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.12□□□□□ -2.07
RGPD3A6NKT7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.12□□□□□ -2.07
RGPD3A6NKT7 MTND5P3-201ENST00000438536 1800 ntBASIC2.12□□□□□ -2.07
RGPD3A6NKT7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms