Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC108059.3-201ENST00000456388 214 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 RNU7-59P-201ENST00000459101 61 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AC023598.1-201ENST00000472521 361 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AC093278.1-201ENST00000494700 600 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AC020893.1-201ENST00000502452 580 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 SAP18P1-201ENST00000512058 390 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AC007991.1-201ENST00000522680 631 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AP000857.1-201ENST00000532151 543 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AC087883.1-201ENST00000551882 391 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AL121603.1-201ENST00000553815 142 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AF250324.2-201ENST00000608299 610 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AL161734.1-201ENST00000609720 557 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 MIR6748-201ENST00000610433 71 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 MIR6875-201ENST00000617506 72 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 AL158209.2-201ENST00000619266 216 ntBASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TCRBV7S3A2A0A539 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 U3.15-201ENST00000365398 212 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 RNU6-637P-201ENST00000384050 107 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 Z98941.1-201ENST00000407764 100 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 RNU6-516P-201ENST00000411381 104 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 RHEBP3-201ENST00000411920 351 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 RWDD4P2-201ENST00000426392 563 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 RSL24D1P6-201ENST00000426934 401 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 MTCO2P11-201ENST00000431069 680 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC003071.1-201ENST00000451219 789 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC007967.1-201ENST00000455422 1159 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC084357.1-201ENST00000473404 255 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC010493.1-201ENST00000513479 292 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 RNA5SP164-201ENST00000516533 110 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 RNA5SP337-201ENST00000517007 109 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC126177.3-201ENST00000551839 688 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AL133153.1-201ENST00000557756 303 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AL845331.3-202ENST00000562856 261 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 RN7SL703P-201ENST00000578485 302 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 OR4K8P-201ENST00000578842 1048 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AL139286.1-201ENST00000604465 483 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AP000860.1-201ENST00000605250 559 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC007390.2-201ENST00000606229 3803 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC093838.1-201ENST00000613014 469 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 CR381653.2-201ENST00000624041 768 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 MTCO1P9-201ENST00000505577 1534 ntBASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TCRBV7S3A2A0A539 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AL365440.1-201ENST00000436135 2167 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 RNU6-181P-201ENST00000363225 107 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 MTCO3P40-201ENST00000392516 676 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 RNU2-62P-201ENST00000410868 191 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 MTCYBP5-201ENST00000423752 1135 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 USP9YP18-201ENST00000425912 695 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AC137499.1-201ENST00000427602 88 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 C4BPAP2-201ENST00000428434 478 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 OR4K11P-201ENST00000431829 904 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 AC119618.1-201ENST00000434191 222 ntBASIC3.72□□□□□ -1.81
TCRBV7S3A2A0A539 UBE2V1P8-201ENST00000437166 265 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms