Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 OR4R1P-201ENST00000529879 463 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 OR4P1P-201ENST00000530808 1136 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 AC068339.2-201ENST00000534395 618 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 MIR4672-201ENST00000583126 81 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 RPL23AP92-201ENST00000603609 255 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 AC003001.2-201ENST00000616294 831 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 AC106730.3-201ENST00000624568 641 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 NUP58P1-201ENST00000502546 1738 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 TPTE2P4-201ENST00000258589 1605 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 SGO1P1-201ENST00000603525 1447 ntBASIC1.91□□□□□ -2.1
TRAV41A0A0B4J266 ZNF271P-202ENST00000465539 1970 ntBASIC1.9□□□□□ -2.1
TRAV41A0A0B4J266 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.9□□□□□ -2.1
TRAV41A0A0B4J266 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
TRAV41A0A0B4J266 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 SDAD1P2-201ENST00000441308 2028 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 MTND4P21-201ENST00000453886 1357 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 Y_RNA.500-201ENST00000384466 111 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 MIR16-1-201ENST00000385271 89 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 RNA5SP354-201ENST00000391247 136 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 AL513475.1-201ENST00000406602 315 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 AL023807.1-201ENST00000407932 359 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 RPS15AP7-201ENST00000439294 405 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 UBE2DNL-203ENST00000474922 222 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 RPS15AP34-201ENST00000487776 387 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 RPS27P26-201ENST00000494583 239 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 AC021269.2-201ENST00000532318 330 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 AC010546.1-201ENST00000569391 485 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 MTCO1P40-201ENST00000574371 625 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 AC079791.1-201ENST00000605356 973 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 AC104237.2-201ENST00000612456 443 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 AC025034.2-201ENST00000623264 286 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 MIR1291-201ENST00000627649 87 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 Z82209.1-201ENST00000422141 2135 ntBASIC1.9□□□□□ -2.11
TRAV41A0A0B4J266 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC008568.2-201ENST00000623862 2313 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 SNORA67.1-201ENST00000364749 141 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC007064.1-201ENST00000412238 351 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC008173.1-201ENST00000418901 264 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 NANOGP5-201ENST00000424456 877 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 RPL7L1P10-201ENST00000427790 463 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 OR4K11P-201ENST00000431829 904 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC005345.1-201ENST00000431868 217 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC236972.1-201ENST00000433225 199 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 GTF2IP12-201ENST00000456547 356 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 CDC42P1-201ENST00000456658 548 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 RBM43P1-201ENST00000476891 1081 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 RPL31P41-201ENST00000477967 372 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 RPL36AP51-201ENST00000487216 318 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC114322.1-201ENST00000506771 926 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC010468.3-201ENST00000508225 458 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC234781.5-201ENST00000508429 271 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC027176.1-201ENST00000560204 514 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 OR1M4P-201ENST00000589199 287 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC004852.3-201ENST00000614131 326 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC091925.2-201ENST00000625059 256 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 AC243829.7-201ENST00000633081 225 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 IGHVIII-44-202ENST00000636235 289 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 CR848007.1-201ENST00000442354 1699 ntBASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV41A0A0B4J266 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms