Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC006020.1-201ENST00000420179 1854 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 AC004944.1-201ENST00000517807 3059 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 SET-203ENST00000372688 801 ntTSL 2 BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 SNORA36C-201ENST00000384289 132 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 TAS2R15P-201ENST00000390674 928 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 USP9YP27-201ENST00000418455 438 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 PNRC2P1-201ENST00000423940 420 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 AL591719.1-201ENST00000444669 744 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 SNRPGP6-201ENST00000451124 220 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 RPS20P24-201ENST00000457473 361 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 OR9N1P-202ENST00000494289 481 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 AP001646.1-201ENST00000527936 915 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 HMGB1P14-201ENST00000557424 591 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 AC009097.3-201ENST00000563557 1018 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 MIR4672-201ENST00000583126 81 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 AC055876.5-201ENST00000605667 259 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 AC040168.1-201ENST00000623594 991 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 AC010149.2-201ENST00000637608 315 ntBASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
TRAV3A0A0B4J244 SDAD1P2-201ENST00000441308 2028 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 AC111188.2-201ENST00000529697 1387 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 RNA5SP80-201ENST00000410475 111 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 PTP4A1P7-201ENST00000423476 514 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 RPL27AP8-201ENST00000424277 446 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 EZH2P1-201ENST00000431167 291 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 RNF2P1-201ENST00000442955 1010 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 RPL23AP49-201ENST00000492925 468 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 RPL23AP94-201ENST00000512518 302 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 AC118465.1-201ENST00000513820 1271 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 RNA5SP471-201ENST00000516971 106 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 ISCA1P3-201ENST00000577104 373 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 AC010738.1-201ENST00000604970 987 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 AC034102.8-201ENST00000615146 484 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 AC027309.3-201ENST00000623419 351 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 NUP58P1-201ENST00000502546 1738 ntBASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV3A0A0B4J244 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 RNA5SP27-201ENST00000363839 119 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 RNA5SP160-201ENST00000364866 120 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 SNORD51.1-201ENST00000365405 77 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 AC007064.1-201ENST00000412238 351 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 AC005005.2-201ENST00000420779 380 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 AL031659.1-201ENST00000447075 539 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 RPL23AP7-203ENST00000449021 469 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 AL118520.1-201ENST00000450770 291 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 AC109486.1-201ENST00000486833 374 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 IGLV3-17-201ENST00000519099 244 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 SUB1P1-201ENST00000524415 382 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 ATP5F1P7-201ENST00000567330 760 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 AC012443.1-201ENST00000605605 231 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 AC245517.5-201ENST00000611529 162 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 AC025034.2-201ENST00000623264 286 ntBASIC1.73□□□□□ -2.13
TRAV3A0A0B4J244 AC093591.3-201ENST00000634516 308 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms