Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV13-2A0A0B4J235 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 RNU6-821P-201ENST00000390995 107 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 MIR1303-201ENST00000408625 86 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 RNU2-52P-201ENST00000410680 190 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC000041.1-201ENST00000439655 175 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 FGF7P5-201ENST00000441829 291 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 USP9YP8-201ENST00000441913 500 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC044797.1-201ENST00000445744 679 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AL627224.1-201ENST00000448334 444 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 RPL23AP41-201ENST00000484754 458 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC011825.1-201ENST00000484967 388 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC006499.2-201ENST00000513470 337 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC104057.1-201ENST00000515547 497 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 SNORD116-30-201ENST00000516468 85 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 EIF5A2P1-201ENST00000564027 460 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC011260.1-201ENST00000578420 472 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC005498.1-201ENST00000592125 465 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC040174.2-201ENST00000602701 465 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AL449363.1-201ENST00000617815 186 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC109809.1-201ENST00000619665 545 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AL353748.2-201ENST00000622148 471 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 AC073346.2-201ENST00000624724 2058 ntBASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TRAV13-2A0A0B4J235 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 MIR670-201ENST00000390142 98 ntBASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 AL136372.1-201ENST00000403060 228 ntBASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 SNORD56-201ENST00000413522 71 ntBASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 FCF1P2-201ENST00000415284 583 ntBASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 AC107083.1-201ENST00000439643 279 ntBASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 TPT1P14-201ENST00000448018 505 ntBASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 SNORA31.23-201ENST00000517219 133 ntBASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 RPL7P20-201ENST00000520308 745 ntBASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 AL109918.3-201ENST00000603072 338 ntBASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 AC002487.1-201ENST00000604565 994 ntBASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 OR1S1-201ENST00000624470 978 ntBASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV13-2A0A0B4J235 TPTE2P4-201ENST00000258589 1605 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 SNORA71.3-201ENST00000362582 128 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 RNU6-270P-201ENST00000364131 105 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 RNU6-220P-201ENST00000390919 107 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 GSTA9P-201ENST00000406231 611 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 AL356967.1-201ENST00000406305 431 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 SNORA11.4-201ENST00000408823 129 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 TATDN1P1-201ENST00000414123 891 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 RPS3AP9-201ENST00000417027 792 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 AL356867.1-201ENST00000429623 299 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 AC092573.2-201ENST00000434546 243 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 ARL5AP3-201ENST00000439327 386 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 ATG12P2-201ENST00000456830 416 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 RNU7-23P-201ENST00000459465 62 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 RPL23AP42-201ENST00000471152 471 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 AC072039.1-201ENST00000477611 581 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 RN7SL432P-201ENST00000484057 298 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 AC023141.11-201ENST00000508864 202 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 SNORA31.25-201ENST00000517242 134 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 MIR4287-201ENST00000579398 78 ntBASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TRAV13-2A0A0B4J235 AL451007.1-201ENST00000595491 289 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms