Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL512504.1-201ENST00000415494 778 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 RPS3AP9-201ENST00000417027 792 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AC233279.1-201ENST00000455300 423 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AC008427.1-201ENST00000503102 655 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 HMGB1P46-201ENST00000520062 610 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 NDUFS5P6-201ENST00000529136 295 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 MIR1273D-201ENST00000577266 86 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AF131215.7-201ENST00000602443 707 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AL356280.1-201ENST00000603614 379 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 DPRXP5-201ENST00000604662 539 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AC103710.1-201ENST00000610003 901 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AL161629.2-201ENST00000615347 275 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AC090116.1-201ENST00000615679 446 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 AC018926.3-201ENST00000618841 406 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 SCARNA15.3-201ENST00000626315 122 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 SCARNA4.1-201ENST00000628597 123 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 MIR203B-201ENST00000636080 86 ntBASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
TRAV27A0A087WT01 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.78□□□□□ -2.13
TRAV27A0A087WT01 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.78□□□□□ -2.13
TRAV27A0A087WT01 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 AC087359.1-201ENST00000508335 1740 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 AC123912.3-201ENST00000600907 1367 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 HSPE1P11-201ENST00000339579 310 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 RNU6-1074P-201ENST00000383995 104 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 RNU4-52P-201ENST00000384209 138 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 Z98742.3-201ENST00000418637 326 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 SRIP2-201ENST00000428470 166 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 MYL8P-204ENST00000431574 518 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 AC096638.1-201ENST00000444678 216 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 RNU7-26P-201ENST00000458980 63 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 AC078857.1-201ENST00000469870 667 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 MTAPP1-201ENST00000489154 819 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 MLLT10P2-201ENST00000506434 249 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 AC069306.1-201ENST00000507006 843 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 AC104057.1-201ENST00000515547 497 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 COX6CP5-201ENST00000527162 228 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 MIR3935-201ENST00000583472 104 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 MIR3117-201ENST00000584034 78 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 HMGB1P24-202ENST00000615653 685 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 AL356118.1-201ENST00000635272 1078 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 AC009812.4-201ENST00000569134 1805 ntBASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV27A0A087WT01 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 MIR449A-201ENST00000362113 91 ntBASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 SNORA6-201ENST00000384033 151 ntBASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 RNU2-20P-201ENST00000410425 191 ntBASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 RNU6-712P-201ENST00000410558 100 ntBASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 AL135786.1-201ENST00000415892 214 ntBASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 UBE2V1P5-201ENST00000440070 405 ntBASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 AC009237.8-201ENST00000445492 379 ntBASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 AC092798.1-201ENST00000458542 409 ntBASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 RPL31P41-201ENST00000477967 372 ntBASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 RPS27P26-201ENST00000494583 239 ntBASIC1.76□□□□□ -2.13
TRAV27A0A087WT01 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms