Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC005297.2-201ENST00000450430 606 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 CYCSP35-201ENST00000451978 304 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 RBMY2UP-201ENST00000453474 324 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 SSXP1-201ENST00000453640 473 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 BX322784.1-201ENST00000455793 1077 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 BTF3P5-201ENST00000457252 467 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 RPL21P104-201ENST00000464143 478 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC034236.1-201ENST00000469891 373 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC078785.3-201ENST00000476607 425 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 HMGB1P36-201ENST00000487709 576 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC096751.1-202ENST00000502691 1067 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 MTND5P4-201ENST00000514978 288 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 RNU2-27P-201ENST00000516185 142 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC013828.2-201ENST00000532487 235 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC068587.4-201ENST00000533893 186 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC007458.1-201ENST00000542812 373 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 MIR5697-201ENST00000578045 78 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 MTND1P15-201ENST00000579262 949 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC005771.1-201ENST00000585581 349 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC024220.1-201ENST00000603675 484 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AL139286.2-201ENST00000606838 396 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC073968.1-201ENST00000618594 637 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC015967.1-201ENST00000619893 476 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 AC009318.4-201ENST00000620496 486 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 U6.98-201ENST00000637157 84 ntBASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SNX9Q9Y5X1 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 RNU6-600P-201ENST00000362524 99 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 RNU4-35P-201ENST00000362588 141 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 RNA5SP50-201ENST00000363731 107 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 RNU5E-5P-201ENST00000365379 116 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 MIR490-201ENST00000384865 128 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 MIR183-201ENST00000384958 110 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 EI24P2-201ENST00000397776 1076 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 RPL31P1-201ENST00000398116 372 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AC017079.2-201ENST00000416102 485 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 FNDC3CP-201ENST00000420795 1155 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AL513174.1-201ENST00000423182 629 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AL451062.2-201ENST00000427515 271 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 HMGB1P12-201ENST00000438594 598 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 MTCYBP1-201ENST00000454315 1119 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 RN7SL594P-201ENST00000470590 287 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 VN1R17P-201ENST00000472048 1090 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 RPS4XP13-201ENST00000483219 789 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AC093767.1-201ENST00000504523 156 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 MTND2P33-201ENST00000506452 1031 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AC022447.3-201ENST00000506865 495 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 RNU6-405P-201ENST00000516637 110 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AL121576.1-201ENST00000556055 276 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AC107954.1-201ENST00000565906 727 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 MIR4528-201ENST00000577763 90 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 MIR3690-201ENST00000580266 75 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 BNIP3P23-201ENST00000599655 511 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 DEFB131E-202ENST00000602581 683 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AL592295.2-201ENST00000612578 206 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 AL359740.1-201ENST00000624340 592 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 U6.105-201ENST00000637379 88 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 ZNF826P-207ENST00000622273 1910 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 CEP170P1-201ENST00000502249 4587 ntBASIC3.75□□□□□ -1.81
SNX9Q9Y5X1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SNX9Q9Y5X1 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms