Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 AC005951.1-201ENST00000576706 485 ntBASIC3.21□□□□□ -1.9
USP16Q9Y5T5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.21□□□□□ -1.9
USP16Q9Y5T5 AL445435.1-201ENST00000604232 665 ntBASIC3.21□□□□□ -1.9
USP16Q9Y5T5 AL627309.6-201ENST00000606857 840 ntBASIC3.21□□□□□ -1.9
USP16Q9Y5T5 AC024060.1-201ENST00000607052 494 ntBASIC3.21□□□□□ -1.9
USP16Q9Y5T5 AC104985.3-201ENST00000623479 597 ntBASIC3.21□□□□□ -1.9
USP16Q9Y5T5 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.21□□□□□ -1.9
USP16Q9Y5T5 AC099654.9-201ENST00000637055 678 ntBASIC3.21□□□□□ -1.9
USP16Q9Y5T5 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
USP16Q9Y5T5 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 RNU6-707P-201ENST00000364647 95 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 RNA5SP210-201ENST00000391034 120 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 RNU6-1300P-201ENST00000391046 108 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 RNU4-78P-201ENST00000410940 126 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 RNU2-71P-201ENST00000411395 189 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 MTCO3P1-205ENST00000422088 832 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 AC005345.1-201ENST00000431868 217 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 MTATP6P14-201ENST00000455189 673 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 OR6K1P-201ENST00000456766 971 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 RN7SL297P-201ENST00000483161 293 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 RN7SL636P-201ENST00000497504 294 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 AC096571.1-202ENST00000506634 735 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 RN7SKP244-201ENST00000516513 307 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 CKS1BP7-201ENST00000522230 235 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 SNORD39.3-201ENST00000584451 71 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 AL035411.2-201ENST00000604022 421 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 AC069545.1-201ENST00000605671 358 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 AL391834.2-201ENST00000609982 546 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 PART1_2.1-201ENST00000612397 250 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 MIR6715A-201ENST00000615929 79 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 AC123767.1-202ENST00000620407 817 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 LRRC77P-213ENST00000637727 880 ntBASIC3.2□□□□□ -1.9
USP16Q9Y5T5 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP16Q9Y5T5 AC010733.2-201ENST00000589496 5702 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 SUGT1P1-201ENST00000379514 476 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AL359511.1-201ENST00000402970 211 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 RNU4-53P-201ENST00000410828 140 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 NPM1P11-201ENST00000417106 855 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AC092634.6-201ENST00000418558 192 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 C1DP1-201ENST00000426049 402 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 USP9YP22-201ENST00000438971 294 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 RPL7P52-201ENST00000449200 742 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AC104073.1-201ENST00000451988 151 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 snoU109.3-201ENST00000459477 145 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 MTND4LP22-201ENST00000508209 276 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 MTCO3P44-201ENST00000510977 541 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AP000790.1-201ENST00000528891 737 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AP002770.2-201ENST00000543613 532 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AL669831.4-202ENST00000590817 238 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AC136601.2-201ENST00000604356 474 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AC009269.6-201ENST00000621778 588 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AC099654.8-201ENST00000637757 681 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 AC130650.2-201ENST00000618736 2403 ntBASIC3.19□□□□□ -1.9
USP16Q9Y5T5 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.19□□□□□ -1.9
USP16Q9Y5T5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.18□□□□□ -1.9
USP16Q9Y5T5 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.18□□□□□ -1.9
USP16Q9Y5T5 RNU6-339P-201ENST00000384310 107 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AL136133.1-201ENST00000413694 376 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.18□□□□□ -1.9
USP16Q9Y5T5 SAR1AP4-201ENST00000429225 591 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 GTF2IP7-202ENST00000436677 309 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AC010095.1-201ENST00000443543 144 ntBASIC3.18□□□□□ -1.9
USP16Q9Y5T5 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms