Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RN7SKP13-201ENST00000515933 244 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 RNU6-720P-201ENST00000516363 108 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 HSPE1P5-201ENST00000561489 272 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AC022968.1-201ENST00000567372 442 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AC004696.1-201ENST00000614345 607 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AC068880.5-201ENST00000624331 290 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AC008785.1-201ENST00000624475 456 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 RNA5SP196-201ENST00000625967 102 ntBASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
COL4A3BPQ9Y5P4 AC090740.1-201ENST00000623193 2262 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 MTND5P26-201ENST00000426018 1752 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 OR4G2P-202ENST00000641004 1759 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 MIR513A2-201ENST00000385249 127 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC108032.1-201ENST00000416706 207 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AL356095.1-201ENST00000417217 199 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AL358934.1-201ENST00000432346 324 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 HSFY6P-201ENST00000445573 403 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC079781.2-201ENST00000446424 169 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 C1DP4-201ENST00000455429 424 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC004924.1-201ENST00000480160 781 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 RNA5SP154-201ENST00000516193 111 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AP003072.2-201ENST00000527756 676 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 ARL2BPP2-201ENST00000550907 489 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC005951.2-201ENST00000576282 495 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 MIR6867-201ENST00000610636 67 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC012531.5-201ENST00000611375 151 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC138649.3-201ENST00000622154 254 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 AC112484.5-201ENST00000624189 228 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 CR848007.1-201ENST00000442354 1699 ntBASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL4A3BPQ9Y5P4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 PRO1804-201ENST00000623780 2050 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AL137003.2-201ENST00000606924 2538 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 SPRR2C-201ENST00000290702 219 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AC073343.1-201ENST00000328239 651 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 RNA5SP130-201ENST00000364431 114 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 GSTA9P-201ENST00000406231 611 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 RNU2-36P-201ENST00000410361 191 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 RN7SKP140-201ENST00000411196 284 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AL513331.1-201ENST00000411908 397 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 AC020550.1-201ENST00000447385 163 ntBASIC4.62□□□□□ -1.67
COL4A3BPQ9Y5P4 SNRPGP6-201ENST00000451124 220 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms