Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC055876.1-202ENST00000567053 138 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC005255.1-201ENST00000593748 216 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AL031666.3-201ENST00000609320 1006 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC093788.1-201ENST00000609356 927 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 AC023043.4-201ENST00000612081 449 ntBASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHGA3Q9Y5H0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 RNA5SP515-201ENST00000364570 118 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU6-1283P-201ENST00000365314 105 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 MIR1-2-201ENST00000384961 85 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU2-36P-201ENST00000410361 191 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 RN7SKP263-201ENST00000411194 309 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AC004552.1-201ENST00000419089 348 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AL353193.1-201ENST00000421444 268 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 SEPT14P3-201ENST00000439401 183 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AL732372.2-207ENST00000445840 183 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 NDUFS5P3-201ENST00000450668 321 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 SEPT14P2-201ENST00000453405 183 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 RNU7-182P-201ENST00000459009 62 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 RN7SL98P-201ENST00000462271 300 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AP000873.1-201ENST00000463987 400 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 RPS26P3-201ENST00000470205 348 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AC010631.1-201ENST00000474150 156 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 RPL23AP65-201ENST00000475608 468 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AC090543.2-201ENST00000483963 348 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 RPL31P13-201ENST00000484151 370 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AC004057.1-201ENST00000485827 348 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 SEPT14P4-201ENST00000513445 186 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 RNA5SP154-201ENST00000516193 111 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AC134698.4-201ENST00000523451 826 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 FO082796.1-201ENST00000523795 183 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AK6P1-201ENST00000540219 478 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AC174048.1-201ENST00000603389 144 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AC010591.1-201ENST00000603941 649 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AP000907.4-201ENST00000604143 237 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AC067959.1-201ENST00000604334 379 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AP001596.2-201ENST00000608410 312 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 SDR42E1P2-201ENST00000614861 481 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 AC114781.5-201ENST00000615297 108 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 CKAP2P1-201ENST00000555477 2049 ntBASIC4.34□□□□□ -1.71
PCDHGA3Q9Y5H0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
PCDHGA3Q9Y5H0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 MIR659-201ENST00000384963 97 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 MIR607-201ENST00000385241 96 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 MIR1290-201ENST00000408735 78 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 RNU2-9P-201ENST00000410194 145 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 RNU6-387P-201ENST00000411331 105 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 TMSB10P2-201ENST00000416049 131 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 SNRPEP10-201ENST00000420249 274 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 Z74021.1-201ENST00000423610 407 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 CYCSP43-201ENST00000438233 310 ntBASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.33□□□□□ -1.72
PCDHGA3Q9Y5H0 FAM92A1P2-202ENST00000504766 877 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms