Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 Y_RNA.88-201ENST00000363029 99 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 Y_RNA.255-201ENST00000364581 97 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 RNU6-996P-201ENST00000365438 107 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 SNORA69-201ENST00000383895 132 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 SNORA70C-201ENST00000384538 135 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 RNA5SP239-201ENST00000410218 129 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 RN7SKP177-201ENST00000410567 355 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC022028.1-201ENST00000412054 408 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 USP9YP6-201ENST00000413550 854 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC009237.10-201ENST00000414112 510 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 CALM2P2-201ENST00000428512 440 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 MTATP6P23-201ENST00000440153 476 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 NFU1P2-201ENST00000448700 469 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 FGF7P3-201ENST00000454645 303 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 RPL21P104-201ENST00000464143 478 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC006512.1-201ENST00000468816 291 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC092451.1-201ENST00000480211 153 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 RN7SL817P-201ENST00000480777 288 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AL163973.1-201ENST00000484753 577 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 RN7SL810P-201ENST00000493031 276 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 RPS27AP13-201ENST00000498403 237 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 SNORD60.2-201ENST00000516883 86 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 RNU6-352P-201ENST00000516908 107 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC093249.4-201ENST00000564755 259 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC034105.3-201ENST00000565294 442 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC091979.2-201ENST00000607514 214 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 YWHAEP7-203ENST00000622054 312 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC140113.4-201ENST00000622087 222 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 AC099654.14-201ENST00000638599 341 ntBASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.28□□□□□ -1.72
PCDHGA9Q9Y5G4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 RNY3P3-201ENST00000363816 102 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 RNA5SP515-201ENST00000364570 118 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 SNORA36C-201ENST00000384289 132 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 MIR195-201ENST00000385194 87 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 NDUFS5P1-201ENST00000405668 289 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 RNU6-908P-201ENST00000410160 94 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 RNU2-29P-201ENST00000410423 189 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 RNU6-373P-201ENST00000411247 98 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 RNU2-71P-201ENST00000411395 189 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 TOMM22P1-201ENST00000418578 312 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 AL139413.1-201ENST00000421309 217 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 AC018630.2-202ENST00000422992 927 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 AC011998.1-201ENST00000433403 117 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 RPS15AP9-201ENST00000439856 381 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 GAPDHP27-201ENST00000447427 1020 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 MTND1P18-201ENST00000448191 573 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 MTND3P10-201ENST00000450967 341 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 RNU6-953P-201ENST00000459154 107 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 MRPS17P3-201ENST00000465453 385 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 AP000926.1-201ENST00000479573 241 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 NIPA2P2-201ENST00000496376 1083 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 RNU6-835P-201ENST00000516974 104 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 RN7SKP258-201ENST00000517151 304 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 MIR2116-201ENST00000517221 80 ntBASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.27□□□□□ -1.73
PCDHGA9Q9Y5G4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms