Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 SNORA70.16-201ENST00000516390 95 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 IGLVIV-65-201ENST00000517313 360 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 RPL21P12-201ENST00000559810 515 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 GLUD1P4-201ENST00000590914 418 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AL021997.1-201ENST00000605757 193 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AC064801.1-201ENST00000612025 407 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AL592295.2-201ENST00000612578 206 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AC244100.1-202ENST00000621554 382 ntBASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LSM4Q9Y4Z0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.86
LSM4Q9Y4Z0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.4□□□□□ -1.86
LSM4Q9Y4Z0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.4□□□□□ -1.86
LSM4Q9Y4Z0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.4□□□□□ -1.86
LSM4Q9Y4Z0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LSM4Q9Y4Z0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LSM4Q9Y4Z0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
LSM4Q9Y4Z0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LSM4Q9Y4Z0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 RNU6-1097P-201ENST00000363586 107 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 RNU6-960P-201ENST00000364056 120 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 RNU1-64P-201ENST00000365443 163 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 DEFB109C-201ENST00000382575 264 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 DEFB109B-201ENST00000382656 264 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 RNU2-36P-201ENST00000410361 191 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC011933.1-201ENST00000413334 321 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 OR2AS1P-201ENST00000427827 319 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 FCF1P1-201ENST00000432690 571 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 MTND3P21-201ENST00000433774 331 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC114755.5-201ENST00000447760 831 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC116533.1-201ENST00000459748 321 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC091167.1-201ENST00000492017 396 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 RPS27AP13-201ENST00000498403 237 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 SNORA31.9-201ENST00000516429 84 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 RNU7-51P-201ENST00000516560 62 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 RNU6-1220P-201ENST00000517126 108 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 MIR2116-201ENST00000517221 80 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 CYCSP29-201ENST00000533731 318 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC025884.1-201ENST00000556034 378 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC055876.1-202ENST00000567053 138 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC079587.1-201ENST00000603846 277 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AL136363.1-201ENST00000605349 337 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 ARF4P1-201ENST00000605447 541 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AP002360.4-201ENST00000606980 481 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC004492.1-201ENST00000607036 742 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 ZYXP1-201ENST00000617638 118 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC007546.1-201ENST00000619452 559 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 MIR7702-201ENST00000621931 59 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC091905.1-201ENST00000624400 311 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC124864.2-201ENST00000624736 186 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 LRRC77P-213ENST00000637727 880 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AC018555.1-201ENST00000567548 1980 ntBASIC3.4□□□□□ -1.87
LSM4Q9Y4Z0 AL672296.1-201ENST00000427780 2158 ntBASIC3.39□□□□□ -1.87
LSM4Q9Y4Z0 MTND4P5-201ENST00000435821 1374 ntBASIC3.39□□□□□ -1.87
LSM4Q9Y4Z0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LSM4Q9Y4Z0 RNU6-108P-201ENST00000365558 107 ntBASIC3.39□□□□□ -1.87
LSM4Q9Y4Z0 Y_RNA.516-201ENST00000384541 124 ntBASIC3.39□□□□□ -1.87
LSM4Q9Y4Z0 MIR558-201ENST00000384920 94 ntBASIC3.39□□□□□ -1.87
LSM4Q9Y4Z0 RPS26P8-201ENST00000393490 348 ntBASIC3.39□□□□□ -1.87
LSM4Q9Y4Z0 RPL23AP48-201ENST00000406913 488 ntBASIC3.39□□□□□ -1.87
LSM4Q9Y4Z0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.39□□□□□ -1.87
LSM4Q9Y4Z0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM4Q9Y4Z0 TMSB10P2-201ENST00000416049 131 ntBASIC3.39□□□□□ -1.87
LSM4Q9Y4Z0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM4Q9Y4Z0 NDUFB4P7-201ENST00000423198 363 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms