Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 AC138907.8-201ENST00000623981 2256 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 RNU6-1059P-201ENST00000363752 98 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 RNA5SP30-201ENST00000365552 115 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 SNORD14.1-201ENST00000365609 90 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 RNA5SP332-201ENST00000391063 115 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 RPS4XP7-201ENST00000406274 780 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 HMGB1P9-201ENST00000429856 646 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 AL359073.1-201ENST00000448036 403 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 BX276092.4-201ENST00000452056 248 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 RPL38P3-201ENST00000484463 213 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 FTH1P9-201ENST00000513251 355 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 AC021006.3-201ENST00000530771 192 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 AC060780.2-201ENST00000589047 198 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 AC004805.2-201ENST00000605382 482 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 HMGN2P28-201ENST00000606102 262 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 AC144833.1-201ENST00000567953 4089 ntBASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HCN4Q9Y3Q4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 U3.10-201ENST00000364459 214 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 Y_RNA.276-201ENST00000364732 109 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 Y_RNA.350-201ENST00000365409 98 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 SNORA70.4-201ENST00000365509 134 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 RNU6-146P-201ENST00000384602 108 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AL139039.1-201ENST00000401900 692 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 ACA64.4-201ENST00000459070 127 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 RNU6-1132P-201ENST00000459214 107 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AC009127.1-201ENST00000467090 155 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 SNORA40.14-201ENST00000516543 86 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 RNU6-352P-201ENST00000516908 107 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AC007991.1-201ENST00000522680 631 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 VN1R85P-201ENST00000601587 426 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AL034351.1-201ENST00000605288 668 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AL391358.1-201ENST00000605342 190 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 AL138825.1-201ENST00000618587 192 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 A2MP1-204ENST00000566278 4130 ntBASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HCN4Q9Y3Q4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 SNURFL-201ENST00000309296 343 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 RNU6-713P-201ENST00000384761 107 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 MT-TC-201ENST00000387405 66 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 RPL23AP83-201ENST00000434984 473 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 CYCSP43-201ENST00000438233 310 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 RPL21P2-201ENST00000440049 481 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 EIF4A1P11-201ENST00000451239 222 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 SNORD127-201ENST00000458892 86 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 RNU1-88P-201ENST00000459274 128 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 AC010683.1-201ENST00000473673 378 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 NIP7P2-201ENST00000485801 544 ntBASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.55□□□□□ -1.52
HCN4Q9Y3Q4 AC093852.1-201ENST00000503587 266 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms