Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MRPS28Q9Y2Q9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 SPRR2C-201ENST00000290702 219 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 RNU6-28P-201ENST00000362378 107 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 RNU6-600P-201ENST00000362524 99 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 RNY4P24-201ENST00000362735 96 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 RNU6-989P-201ENST00000362756 107 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 RNU4-1-201ENST00000363925 141 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 RNU6-335P-201ENST00000364563 113 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AP000567.1-201ENST00000406413 156 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AC009237.5-201ENST00000414271 501 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 MTATP6P27-201ENST00000416987 621 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 MTCYBP24-201ENST00000420387 1106 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AC005517.2-201ENST00000424673 553 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 SDCBPP1-201ENST00000440192 890 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 snoU109.1-201ENST00000459339 135 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 VN1R17P-201ENST00000472048 1090 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 RPS3AP50-201ENST00000487064 803 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AL358832.1-201ENST00000497800 389 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 NDUFB4P2-201ENST00000509515 391 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 SNORA18.6-201ENST00000516792 115 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 RNU6-714P-201ENST00000516963 103 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 MTCO2P4-201ENST00000517968 247 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 MTCYBP41-201ENST00000528913 1123 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AP003181.2-201ENST00000528941 181 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 MIR3690-201ENST00000580266 75 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AL022154.1-201ENST00000604698 785 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AC126118.1-201ENST00000607744 628 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AC006023.2-201ENST00000609916 167 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AL355472.4-201ENST00000610233 626 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AC073073.2-201ENST00000609827 2578 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 PABPC1P7-201ENST00000413177 1513 ntBASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
MRPS28Q9Y2Q9 AC091152.2-201ENST00000591628 2569 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC138915.3-201ENST00000562908 1389 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 OR5J1P-201ENST00000313544 939 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AL161781.1-201ENST00000354277 403 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 RNA5SP258-201ENST00000362750 119 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 RNU6-359P-201ENST00000365466 108 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 RNA5SP317-201ENST00000410176 116 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 RNA5SP311-201ENST00000411290 116 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AL353777.1-201ENST00000425552 326 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AL662791.1-201ENST00000441992 928 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 RPL17P49-201ENST00000443728 411 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC003071.1-201ENST00000451219 789 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC104308.1-201ENST00000454621 333 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 HMGB1P25-201ENST00000468402 607 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC103987.1-201ENST00000473394 348 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC126182.1-201ENST00000478134 357 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC004924.1-201ENST00000480160 781 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 FAM172BP-201ENST00000487497 1089 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AP001025.2-201ENST00000490908 477 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 RPL9P6-201ENST00000492764 598 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC109927.2-201ENST00000506416 303 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 HMGB3P15-201ENST00000507326 574 ntBASIC3.17□□□□□ -1.9
MRPS28Q9Y2Q9 AC006390.1-201ENST00000508068 283 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms