Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 AC087190.4-201ENST00000574616 8334 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 AC009812.4-201ENST00000569134 1805 ntBASIC4.34□□□□□ -1.71
CCM2LQ9NUG4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.34□□□□□ -1.72
CCM2LQ9NUG4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCM2LQ9NUG4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCM2LQ9NUG4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AC007390.2-201ENST00000606229 3803 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 RNU6-188P-201ENST00000364207 107 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 SNORA7.2-201ENST00000364446 145 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AL356776.1-201ENST00000406574 447 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 RNA5SP104-201ENST00000410989 118 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 RNU6-373P-201ENST00000411247 98 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AC012498.1-201ENST00000424037 437 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 MTCO1P39-201ENST00000426148 480 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AC079780.1-201ENST00000428259 207 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 HLA-N-201ENST00000437516 135 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 GAPDHP27-201ENST00000447427 1020 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 RPS24P6-201ENST00000452670 400 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 HMGB1P22-201ENST00000505315 124 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 RNA5SP401-201ENST00000515920 127 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 RNU1-6P-201ENST00000516290 144 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 SNORA31.22-201ENST00000517204 135 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 NRON-201ENST00000517270 370 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 OR5AL2P-201ENST00000532185 920 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 FAM60BP-201ENST00000578364 658 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AC015917.1-201ENST00000579654 510 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AC012417.1-201ENST00000582307 1039 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AC010928.3-201ENST00000587712 541 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AC010201.1-201ENST00000605051 540 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 AC099654.2-201ENST00000433031 1980 ntBASIC4.33□□□□□ -1.72
CCM2LQ9NUG4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC004972.1-201ENST00000623934 2209 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 XIAPP3-201ENST00000312918 795 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 RNU1-15P-201ENST00000353977 144 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AL136116.1-201ENST00000403591 381 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 NDUFS5P1-201ENST00000405668 289 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 RNU6-387P-201ENST00000411331 105 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC114755.2-201ENST00000413520 361 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 EIF1P3-201ENST00000423841 334 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 RPL23AP25-201ENST00000430973 463 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 USP9YP7-201ENST00000436723 430 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AL353748.1-201ENST00000440753 474 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC073415.1-201ENST00000449240 153 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 USP9YP32-201ENST00000452432 430 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 FGF7P3-201ENST00000454645 303 ntBASIC4.32□□□□□ -1.72
CCM2LQ9NUG4 AC079804.1-201ENST00000461922 436 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms