Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 RNU1-105P-201ENST00000363470 161 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 SNORA16B-201ENST00000364674 135 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 MT-TC-201ENST00000387405 66 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 EIF1AXP1-201ENST00000419267 435 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 HMGN2P19-201ENST00000425149 265 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AC009414.1-201ENST00000427200 443 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 MTCYBP45-201ENST00000435243 565 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 OR6K5P-201ENST00000447050 945 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 RNA5SP233-201ENST00000459153 113 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AC096571.1-202ENST00000506634 735 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 HMGN1P28-201ENST00000521340 364 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 SNRPGP16-201ENST00000533275 226 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AC139103.1-201ENST00000534696 1030 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 GLYCAM1-201ENST00000546596 285 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AL049838.1-201ENST00000563647 981 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 MIR3616-201ENST00000584070 92 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 AC091932.3-201ENST00000624223 323 ntBASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.33□□□□□ -2.2
CDC42SE2Q9NRR3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 CR848007.1-201ENST00000442354 1699 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 AC087359.1-201ENST00000508335 1740 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 RNU6-374P-201ENST00000364146 108 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 SNORA68.1-201ENST00000364537 132 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 RNU6-761P-201ENST00000384148 107 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 AL023284.1-201ENST00000403956 276 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 RNA5SP56-201ENST00000410277 118 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 AL135786.1-201ENST00000415892 214 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 AL445646.1-201ENST00000431784 216 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 OR6C72P-201ENST00000451403 892 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 ANKRD26P4-201ENST00000455755 950 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 AL359385.1-201ENST00000456509 365 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 MTAPP1-201ENST00000489154 819 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 SNORA26.10-201ENST00000516427 141 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 RNU2-44P-201ENST00000516795 194 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 AC103783.1-201ENST00000520506 373 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 AL669831.4-202ENST00000590817 238 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 AC128687.1-201ENST00000605304 619 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 OR10AB1P-201ENST00000609613 938 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 AC103710.1-201ENST00000610003 901 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 AC097372.4-201ENST00000625025 466 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 MFSD8-245ENST00000641743 948 ntBASIC1.32□□□□□ -2.2
CDC42SE2Q9NRR3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 RNU6-1243P-201ENST00000364028 107 ntBASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 Y_RNA.493-201ENST00000384422 102 ntBASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 SNORA64-201ENST00000384674 134 ntBASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 U3.29-201ENST00000391296 212 ntBASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 CIR1P3-201ENST00000405137 479 ntBASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 RN7SKP32-201ENST00000410167 303 ntBASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 COL6A4P2-205ENST00000509855 506 ntBASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 AC022634.1-201ENST00000520765 532 ntBASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 AP002770.2-201ENST00000543613 532 ntBASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 AC106734.1-201ENST00000568646 663 ntBASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 MIR1273D-201ENST00000577266 86 ntBASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 MIR3609-201ENST00000582661 80 ntBASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.31□□□□□ -2.2
CDC42SE2Q9NRR3 AC012493.3-201ENST00000604494 112 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms