Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NLRC4Q9NPP4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NLRC4Q9NPP4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NLRC4Q9NPP4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.15□□□□□ -1.75
NLRC4Q9NPP4 AP001486.2-201ENST00000561652 5113 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 GNG5P1-201ENST00000255500 204 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 SNORA70.2-201ENST00000364506 135 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 RPS26P8-201ENST00000393490 348 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 RPS15AP12-201ENST00000419498 388 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AC019097.1-201ENST00000424783 735 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AL022238.1-201ENST00000442557 355 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 MTCO2P18-201ENST00000457151 658 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AL049714.1-201ENST00000466686 347 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 CDC42P4-201ENST00000510507 563 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 RAC1P2-201ENST00000511164 579 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AC114797.1-201ENST00000514003 728 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 SUMO2P20-201ENST00000520803 283 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AL355836.1-201ENST00000555951 870 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AC099489.2-201ENST00000574976 260 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 ZNF415P1-201ENST00000582279 1166 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 MIR3611-201ENST00000584484 83 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AC083809.1-201ENST00000615051 472 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AC010133.1-201ENST00000615809 842 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AC079684.1-201ENST00000621405 437 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AF117829.1-206ENST00000621883 3802 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AC112484.5-201ENST00000624189 228 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AL136313.1-201ENST00000624804 202 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 MIR492-201ENST00000638676 116 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 MAPK10-373ENST00000641983 6772 ntBASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
NLRC4Q9NPP4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 RNY4P34-201ENST00000364779 95 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 RNU1-39P-201ENST00000383897 165 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 RNU6-297P-201ENST00000384636 107 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 MIR199A2-201ENST00000385289 110 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AL589872.1-201ENST00000426602 288 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AL356867.1-201ENST00000429623 299 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 USP12PX-201ENST00000432383 1057 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AL353706.1-201ENST00000436728 494 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 SNORA71B-202ENST00000439232 272 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 MTND1P12-201ENST00000455231 147 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 CFTRP1-201ENST00000456646 183 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 RPS7P7-201ENST00000463499 571 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AC106872.2-201ENST00000494303 480 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AC010587.1-201ENST00000505809 469 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AC022447.1-201ENST00000515358 464 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AC022695.1-201ENST00000522089 237 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AC120057.2-201ENST00000571520 271 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 DUXAP4-201ENST00000603046 613 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AL137849.1-201ENST00000604767 169 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AC064807.4-201ENST00000607201 407 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AC013476.2-201ENST00000614456 459 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 SDR42E1P2-201ENST00000614861 481 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 SNHG22-203ENST00000617833 660 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AC006338.1-201ENST00000618453 749 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 MIR6500-201ENST00000622700 86 ntBASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NLRC4Q9NPP4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NLRC4Q9NPP4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
NLRC4Q9NPP4 AC008568.2-201ENST00000623862 2313 ntBASIC4.12□□□□□ -1.75
NLRC4Q9NPP4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NLRC4Q9NPP4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NLRC4Q9NPP4 OR1S2-201ENST00000302592 978 ntBASIC4.12□□□□□ -1.75
NLRC4Q9NPP4 SNORA70C-201ENST00000384538 135 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms